This release contains minor changes:
- adds a general aligned/unaligned pie chart
- adds Docker support:
To build your container clone the repository and run docker build -t sequ-into . .
After this has successfully finished, you can run sequ-into via Docker docker run -v D:/data:/mnt/d -it -e DISPLAY=$XSERVER sequ-into . You need to mount the folders you want to access with the -voption, and should also provide a $XSERVER location, e.g. 192.168.2.101:0.0 such that the GUI can be shown.
Linux and Mac OS users may use the docker build, a Windows executable of this release is attached.
Demo data extension
The demo data have been extended with demo use-cases 6 and 7. In use-case 6 simulated reads are used to assess the accuracy of the mapping capabilities of the methods employed by sequ-into, while use-case 7 (ERR3078229-ERR3078231) is a meta-genomics benchmark to assess how well sequ-into assigns reads to a specific organism.