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Different outputs with nequip 0.5.3 vs 0.5.0 for structure relaxation #173

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what I think are as identical as possible hyperparameters as my previous run

Just a quick look makes clear that the hyperparameters are not identical; are you trying to reproduce your past run, or just get similarly good results with different hyperparameters?

In particular, this in newconfig.yaml:

per_species_rescale_scales: dataset_per_atom_total_energy_std

is NOT the defaults that oldconfig.yaml will use (since it doesn't provide any of these options). The default is dataset_forces_rms. This will make a difference, possibly a significant one, especially if your dataset contains little diversity of total energies but large forces on some atoms.

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