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04. plot_taxa_boxplot
Sudarshan edited this page Mar 10, 2018
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1 revision
This is a convenience wrapper function for plotting of top taxa of interest.
library(tibble)
library(microbiomeutilities)
data("biogeogut") # load data
ps0 <- biogeogut
ps0.rel <- transform(ps0, "compositional") # convert counts to relative abundance
pn <- plot_taxa_boxplot(ps0.rel, "Genus", 10, "SampleType", color = "Set2", "Relative abundance of top 10 genera")
pn