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Add Feature Importance Plot Function (#328)
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yanyachen authored and guolinke committed Mar 1, 2017
1 parent 40bf48f commit 166421e
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1 change: 1 addition & 0 deletions R-package/NAMESPACE
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Expand Up @@ -20,6 +20,7 @@ export(lgb.importance)
export(lgb.interprete)
export(lgb.load)
export(lgb.model.dt.tree)
export(lgb.plot.importance)
export(lgb.save)
export(lgb.train)
export(lightgbm)
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50 changes: 50 additions & 0 deletions R-package/R/lgb.plot.importance.R
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#' Plot feature importance as a bar graph
#'
#' Plot previously calculated feature importance: Gain, Cover and Frequency, as a bar graph.
#'
#' @param tree_imp a \code{data.table} returned by \code{\link{lgb.importance}}.
#' @param top_n maximal number of top features to include into the plot.
#' @param measure the name of importance measure to plot, can be "Gain", "Cover" or "Frequency".
#' @param left_margin (base R barplot) allows to adjust the left margin size to fit feature names.
#' @param cex (base R barplot) passed as \code{cex.names} parameter to \code{barplot}.
#'
#' @details
#' The graph represents each feature as a horizontal bar of length proportional to the defined importance of a feature.
#' Features are shown ranked in a decreasing importance order.
#'
#' @return
#' The \code{lgb.plot.importance} function creates a \code{barplot}
#' and silently returns a processed data.table with \code{top_n} features sorted by defined importance.
#'
#' @examples
#'
#' data(agaricus.train, package = 'lightgbm')
#' train <- agaricus.train
#' dtrain <- lgb.Dataset(train$data, label = train$label)
#'
#' params = list(objective = "binary",
#' learning_rate = 0.01, num_leaves = 63, max_depth = -1,
#' min_data_in_leaf = 1, min_sum_hessian_in_leaf = 1)
#' model <- lgb.train(params, dtrain, 20)
#' model <- lgb.train(params, dtrain, 20)
#'
#' tree_imp <- lgb.importance(model, percentage = TRUE)
#' lgb.plot.importance(tree_imp, top_n = 10, measure = "Gain")
#'
#' @export

lgb.plot.importance <- function(tree_imp, top_n = 10, measure = "Gain", left_margin = 10, cex = NULL) {
measure <- match.arg(measure, choices = c("Gain", "Cover", "Frequency"), several.ok = FALSE)
top_n <- min(top_n, nrow(tree_imp))
tree_imp <- tree_imp[order(abs(get(measure)), decreasing = TRUE),][1:top_n,]
if (is.null(cex)) {
cex <- 2.5 / log2(1 + top_n)
}
op <- par(no.readonly = TRUE)
on.exit(par(op))
par(mar = op$mar %>% magrittr::inset(., 2, left_margin))
tree_imp[.N:1,
barplot(height = get(measure), names.arg = Feature, horiz = TRUE,
main = "Feature Importance", xlab = measure, cex.names = cex, las = 1)]
invisible(tree_imp)
}
48 changes: 48 additions & 0 deletions R-package/man/lgb.plot.importance.Rd

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