This repository has been archived by the owner on Mar 21, 2024. It is now read-only.
Build, Test and Deploy #394
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Build, Test and Deploy | |
| on: | |
| pull_request: | |
| branches: [ main ] | |
| schedule: | |
| - cron: '0 0 * * *' | |
| jobs: | |
| linux-build-and-test: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Checkout Repo | |
| uses: actions/checkout@v2 | |
| with: | |
| lfs: true | |
| - name: Set Up Conda Environment | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniconda-version: "latest" | |
| activate-environment: inference | |
| environment-file: ./environment.yml | |
| - name: flake8 | |
| shell: bash -l {0} | |
| run: | | |
| conda activate inference | |
| flake8 . --count --exit-zero --statistics | |
| - name: mypy | |
| shell: bash -l {0} | |
| run: | | |
| conda activate inference | |
| find . -type f -name "*.py" | xargs mypy | |
| - name: Test with pytest | |
| shell: bash -l {0} | |
| env: | |
| CUSTOMCONNSTR_AZUREML_SERVICE_PRINCIPAL_SECRET: ${{ secrets.CUSTOMCONNSTR_AZUREML_SERVICE_PRINCIPAL_SECRET }} | |
| CUSTOMCONNSTR_API_AUTH_SECRET: ${{ secrets.CUSTOMCONNSTR_API_AUTH_SECRET }} | |
| CLUSTER: "training-nc12" | |
| WORKSPACE_NAME: "InnerEye-DeepLearning" | |
| EXPERIMENT_NAME: "api_inference" | |
| RESOURCE_GROUP: "InnerEye-DeepLearning" | |
| SUBSCRIPTION_ID: ${{ secrets.SUBSCRIPTION_ID }} | |
| APPLICATION_ID: ${{ secrets.APPLICATION_ID }} | |
| TENANT_ID: ${{ secrets.TENANT_ID }} | |
| DATASTORE_NAME: "inferencetestimagestore" | |
| IMAGE_DATA_FOLDER: "temp-image-store" | |
| run: | | |
| conda activate inference | |
| pytest --cov=./ --cov-report=html | |
| test-azure-deployment: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Checkout Repo | |
| uses: actions/checkout@v2 | |
| with: | |
| lfs: true | |
| - name: Azure Login | |
| uses: Azure/login@v1 | |
| with: | |
| creds: '{"clientId":"${{ secrets.AZURE_CLIENT_ID }}","clientSecret":"${{ secrets.AZURE_CLIENT_SECRET }}","subscriptionId":"${{ secrets.SUBSCRIPTION_ID }}","tenantId":"${{ secrets.TENANT_ID }}"}' | |
| - name: Deploy Azure App Service | |
| uses: azure/CLI@v1 | |
| with: | |
| azcliversion: 2.42.0 | |
| inlineScript: | | |
| az webapp up --name innereyeinferencetest-${{ github.run_id }} --subscription "InnerEye Dev" -g InnerEye-Inference --sku S1 --location ukwest --runtime PYTHON:3.7 | |
| az webapp delete --name innereyeinferencetest-${{ github.run_id }} --subscription "InnerEye Dev" -g InnerEye-Inference |