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Issues: microbiomedata/nmdc-runtime
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API endpoint Something isn't working
SMALL
1-3 days
/queries:run
allows people to submit queries that make data invalid
bug
#774
opened Nov 14, 2024 by
eecavanna
Core functionality of Something isn't working
X SMALL
Less than 1 day
/data_objects/study/{study_id}
endpoint is not being tested
bug
#725
opened Oct 9, 2024 by
eecavanna
submission portal to mongo ETL code creating records with empty keys
bug
Something isn't working
#711
opened Oct 1, 2024 by
aclum
The Something isn't working
decision needed
tag issues that need to be unblocked by decisions
alldocs
collection can become stale relative to its upstream collections
bug
#699
opened Sep 25, 2024 by
eecavanna
Minter: Using multiple minter instances and discarding their databases can result in ID collisions
bug
Something isn't working
help wanted
Extra attention is needed
unplanned-task
not accounted for during sprint planning, but time sensitive
#615
opened Jul 31, 2024 by
eecavanna
3 tasks
False positive type errors from alldocs ref integrity code
bug
Something isn't working
#576
opened Jul 1, 2024 by
aclum
Mermaid reports "Parse error" and does not display diagram in Minter docs
bug
Something isn't working
X SMALL
Less than 1 day
#522
opened May 14, 2024 by
eecavanna
Minter responds with HTTP 500 and raw Python stack trace
bug
Something isn't working
X SMALL
Less than 1 day
#520
opened May 10, 2024 by
eecavanna
Validation differs between Something isn't working
json:validate
and json:submit
API endpoints
bug
#517
opened May 6, 2024 by
aclum
Runtime uses Not assigned to a sprint or not completed during a planned sprint. Needs to be reprioritized.
bug
Something isn't working
documentation
Improvements or additions to documentation
jsonschema
package without listing it as a dependency in main.in
backlog
#514
opened May 4, 2024 by
eecavanna
Migrations: JSON Schema version generated by LinkML contradicts validator version used by notebook
bug
Something isn't working
X SMALL
Less than 1 day
#511
opened May 4, 2024 by
eecavanna
Endpoint Something isn't working
X SMALL
Less than 1 day
POST /users
responds with HTTP 500 when username already exists
bug
#477
opened Feb 9, 2024 by
eecavanna
Endpoint Something isn't working
X SMALL
Less than 1 day
GET /users/me
responds with HTTP 500 instead of HTTP 401
bug
#475
opened Feb 9, 2024 by
eecavanna
translate_metadata_submission_to_nmdc_schema_database()
Test failing with DagsterInvalidConfigError
bug
#472
opened Feb 1, 2024 by
PeopleMakeCulture
Multiple JSON Validator Tests Failing
bug
Something isn't working
good first issue
Good for newcomers
#469
opened Feb 1, 2024 by
PeopleMakeCulture
API Test Hangs and Blocks Subsequent Tests
bug
Something isn't working
#468
opened Feb 1, 2024 by
PeopleMakeCulture
Multiple Minter Tests Failing
bug
Something isn't working
#467
opened Feb 1, 2024 by
PeopleMakeCulture
queries:run endpoint truncating results
bug
Something isn't working
#434
opened Jan 10, 2024 by
mbthornton-lbl
Changesheet validator rejects some single-value Something isn't working
X SMALL
Less than 1 day
insert
operations
bug
#327
opened Oct 13, 2023 by
eecavanna
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