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Add PERMANOVA functions #1101

Add PERMANOVA functions

Add PERMANOVA functions #1101

Triggered via pull request November 5, 2024 20:29
Status Failure
Total duration 29m 26s
Artifacts 3

rworkflows.yml

on: pull_request
Matrix: rworkflows
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13 errors and 22 warnings
ubuntu-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
[Workflow Telemetry] Unable to finish stat collector
ubuntu-latest (auto)
[Workflow Telemetry] Error
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
ubuntu-latest (auto)
[Workflow Telemetry] Unable to report stat collector result
ubuntu-latest (auto)
[Workflow Telemetry] Error
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
macOS-latest (auto)
Test failures
macOS-latest (auto)
R CMD check found ERRORs
macOS-latest (auto)
Process completed with exit code 1.
windows-latest (auto)
Test failures
windows-latest (auto)
R CMD check found ERRORs
windows-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
The following actions use a deprecated Node.js version and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
harfbuzz 10.0.1_1 is already installed and up-to-date. To reinstall 10.0.1_1, run: brew reinstall harfbuzz
macOS-latest (auto)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (auto)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (auto)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
windows-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/data/annotation/bin/windows/contrib/4.5:
windows-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (auto)
unable to access index for repository https://www.bioconductor.org/packages/3.21/books/bin/windows/contrib/4.5:
windows-latest (auto)
multiple methods tables found for 'setequal'
windows-latest (auto)
replacing previous import 'BiocGenerics::setequal' by 'S4Vectors::setequal' when loading 'IRanges'
windows-latest (auto)
replacing previous import 'BiocGenerics::setequal' by 'S4Vectors::setequal' when loading 'GenomeInfoDb'
windows-latest (auto)
replacing previous import 'BiocGenerics::setequal' by 'S4Vectors::setequal' when loading 'GenomicRanges'
windows-latest (auto)
replacing previous import 'BiocGenerics::setequal' by 'S4Vectors::setequal' when loading 'XVector'
windows-latest (auto)
replacing previous import 'BiocGenerics::setequal' by 'S4Vectors::setequal' when loading 'SummarizedExperiment'
windows-latest (auto)
replacing previous import 'BiocGenerics::setequal' by 'S4Vectors::setequal' when loading 'S4Arrays'
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "Linux-biocversion-devel-r-auto-results", "macOS-biocversion-devel-r-auto-results", "Windows-biocversion-devel-r-auto-results". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/

Artifacts

Produced during runtime
Name Size
Linux-biocversion-devel-r-auto-results
13 MB
Windows-biocversion-devel-r-auto-results
13.1 MB
macOS-biocversion-devel-r-auto-results
13 MB