Simple and Customizable Tables in `R`

Robust Integration of Single-Cell Cytometry Datasets

Identifying reprogrammed metabolic routes given omics data.

A software resource to split a genomics, methylomics or trasncriptomics file into bins and select features within the bins using recursive feature elimination and machine learning

Framework agnostic sliced/tiled inference + interactive ui + error analysis plots

Containers on lambda using Python

This repository shows how to train an object detection algorithm with Detectron2 on Amazon SageMaker

Meta-pipeline to identify transposable element insertions using next generation sequencing data

Segmentation models with pretrained backbones. Keras and TensorFlow Keras.

CytoCompare: an R package for computational comparisons of cytometry profiles.

Official code for Cotatron @ INTERSPEECH 2020

A Variant Call Format reader for Python.

A Python toolbox for quantitative, reproducible flow cytometry analysis

A game theoretic approach to explain the output of any machine learning model.

annotate a VCF with other VCFs/BEDs/tabixed files

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

RNA-Seq analysis workflow

Code and documentation for experiments in the TreeExplainer paper

FusionInspector code

A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.

Implementation of Bayesian Hyperparameter Optimization of Machine Learning Algorithms

Reverse engineering SARS-CoV-2