Design patterns implemented in Java

Lucene tokenizer for chemical structures indexing/searching

Lucene Chemical Index based on RDKit functionality.

Main InChI repository

mzSpecLib: A standard format to exchange/distribute spectral libraries

Package desktop applications as AppImages that run on common Linux-based operating systems, such as RHEL, CentOS, openSUSE, SLED, Ubuntu, Fedora, debian and derivatives. Join #AppImage on irc.liber…

DLNA addon for your self-hosted Nextcloud app instance that allows you to stream Nextcloud users content on client devices in your network. It supports the group folders as well.

A Uniform Manifold Approximation and Projection (UMAP) library for Java, developed by Tag.bio in collaboration with Real Time Genomics.

A conda-smithy repository for py-sirius-ms.

sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java

SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)

openAPI (swagger-condegen) based libraries for different programming languages like R, Python and Ruby

An Android, JavaFx, JS multiplatform datavisualization library with comprehensive DSL

Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)

High-Performance Java-Native-Persistence. Store and load any Java Object Graph or Subgraphs partially, Relieved of Heavy-weight JPA. Microsecond Response Time. Ultra-High Throughput. Minimum of Lat…

This repository contains teaching material for the 3rd International Summer School on Non-Targeted Metabolomics Data Mining for Biomedical Research

Universal workbench incorporating msdial, msfinder, and mrmprobs

The splash, this is the reference documentation

A conda-smithy repository for r-sirius-ms.

A JavaFX library that contains different kind of charts

Dynamic ZFS persistent volume provisioner for Kubernetes

XChart is a light-weight Java library for plotting data.

"Sigma File Manager" is a free, open-source, quickly evolving, modern file manager (explorer / browser) app for Windows and Linux.

A conda-smithy repository for sirius-ms.

OGDF, the Open Graph Drawing Framework/Open Graph algorithms and Data structure Framework.

COIN-OR Branch-and-Cut solver

A conda-smithy repository for coin-or-cbc.