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viscy_data flips iohub's global zarr backend at import time (side effect breaks unrelated I/O)

Status: Open.

#477 In mehta-lab/VisCy;

· ieivanov opened on Jun 30, 2026

EmbeddingWriter produces AnnData with duplicate obs_names

maintenanceMaintenance workMaintenance work

Status: Open.

Task

#475 In mehta-lab/VisCy;

· srivarra opened on Jun 23, 2026

Meet CZI open-source repo requirements

documentationImprovements or additions to documentationImprovements or additions to documentation

maintenanceMaintenance workMaintenance work

Status: Open.

Task

#474 In mehta-lab/VisCy;

· srivarra opened on Jun 23, 2026

Adding a post analysis step for ndea

Status: Open.

#470 In mehta-lab/VisCy;

· srivarra opened on Jun 16, 2026

Add option for reflection TTA

Status: Open.

#462 In mehta-lab/VisCy;

· ieivanov opened on Jun 9, 2026

Zarr codec decision

Status: Open.

#448 In mehta-lab/VisCy;

· edyoshikun opened on Jun 3, 2026

Cross-package test-dep leak: viscy-data tests import viscy-transforms

Status: Open.

#436 In mehta-lab/VisCy;

· edyoshikun opened on May 23, 2026

cytoland example imports upstream microssim — migrate to cubic.metrics

good first issueGood for newcomersGood for newcomers

Status: Open.

#431 In mehta-lab/VisCy;

· alxndrkalinin opened on May 22, 2026

Skip empty timepoints in prediction and normalization stats

Status: Open.

#422 In mehta-lab/VisCy;

· tayllatheodoro opened on May 11, 2026

Rendering static html pages hosted on s3 bucket via this repository

Status: Open.

#421 In mehta-lab/VisCy;

· mattersoflight opened on May 6, 2026

Checkpoint Logging

enhancementNew feature or requestNew feature or request

Status: Open.

#420 In mehta-lab/VisCy;

· edyoshikun opened on May 5, 2026

Cytoland multichannel logging

Status: Open.

#419 In mehta-lab/VisCy;

· edyoshikun opened on May 5, 2026