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Insert-or-ignore for recording which CDS had HMMscan/align done overflows #242

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Insert-or-ignore for recording which CDS had HMMscan/align done overflows#242
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adraismawur
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BiG-SCAPE 2Relates to BiG-SCAPE version 2.0bugSomething isn't workingno-stalePrevent this issue from going staleplannedWill be worked on
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@adraismawur
adraismawur
opened on Dec 21, 2024

This needs batch insertion. TODO Q1 2025

Line in question:

BiG-SCAPE/big_scape/hmm/hmmer.py

Line 179 in 44a4cc7

insert(state_table).prefix_with("OR IGNORE").values(cds_id=cds._db_id)

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BiG-SCAPE 2Relates to BiG-SCAPE version 2.0bugSomething isn't workingno-stalePrevent this issue from going staleplannedWill be worked on

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