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Updates to push to Slicer #1

Merged
merged 27 commits into from
Jul 6, 2023
Merged

Updates to push to Slicer #1

merged 27 commits into from
Jul 6, 2023

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mcespedes99
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Here are all the updates I've done to this repo. There's only one main extension on it (GiftiLoader), which now works in every case I've tried. I've tried freesurfer, fmriprep and hippunfold results as input, no problems so far. I also included tests for the extension as well as documentation. I currently support the conversion of two types of files:

  • Gifti files: along with multiple scalars and colortables.
  • Nifti files: along with lookup tables.

I'm converting the Gifti files to vtk files, which are compatible with 3D Slicer (so you can reload them) and the nifti files to nrrd, which are also compatible with Slicer.

@mcespedes99
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Merging. I need to update the cmakelist next.

@mcespedes99 mcespedes99 merged commit 40cbee4 into main Jul 6, 2023
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