maxrossi91
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personal-website Public
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
JavaScript MIT License UpdatedJun 14, 2025 -
moni Public
MONI: A Pangenomic Index for Finding MEMs
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moni-align Public
A Read Aligner with Multi-Genome References
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pfp-thresholds Public
Computing thresholds from Prefix-free parsing
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r-index Public
Forked from alshai/r-indexAn optimal space run-length Burrows-Wheeler transform full-text index
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levioSAM Public
Forked from alshai/levioSAMLift-over alignments from variant-aware references
C++ MIT License UpdatedMar 4, 2023 -
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mum-phinder Public
Forked from saragiuliani/mum-phinderComputing matching statistics with compressed data structures
C++ MIT License UpdatedJul 2, 2022 -
leviosam2 Public
Forked from milkschen/leviosam2Fast and accurate coordinate conversion between assemblies
C++ MIT License UpdatedJun 14, 2022 -
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AMR_expression_analysis Public
Differential expression exploratory analysis for AMR genes.
HTML MIT License UpdatedFeb 24, 2022 -
ShapedSlp Public
Forked from itomomoti/ShapedSlpSLP encodings that support substring extraction
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pfp-cst Public
A compress suffix array built on prefix-free parsing.
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pfp-cst_app_example Public
Mock example on how to use the PFP-CST
CMake MIT License UpdatedJan 11, 2022 -
sdsl-lite Public
Forked from xxsds/sdsl-liteSuccinct Data Structure Library 3.0 (unstable, prerelease)
C++ Other UpdatedDec 16, 2021 -
vcf-bench Public
Forked from brentp/vcf-benchevaluating vcf parsing libraries
Zig MIT License UpdatedDec 3, 2021 -
faster-minuter Public
Forked from dominikkempa/faster-minuterWavelet tree based on a fixed block boosting technique
C++ MIT License UpdatedNov 7, 2021 -
dynamic-RMQ Public
Dynamic array supporting Range Minimum Queries
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pfp-data-structures Public
Prefix-Free Parsing data structures
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rlbwt2lcp Public
Forked from nicolaprezza/rlbwt2lcpCompute minimum LCP value for each BWT equal-letter run
C++ MIT License UpdatedApr 29, 2020 -
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Big-BWT Public
Forked from alshai/Big-BWTmodified from gitlab.com/manzai/Big-BWT to support fasta files
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phantom-file-system Public
With this file system, you are able to navigate what is not physically reachable anymore (already detached mountable data storages)
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colored-strings-miner Public
Mine unique patterns in colored strings.
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academicons Public
Forked from jpswalsh/academiconsAn icon font for academics
CSS UpdatedNov 13, 2019 -
dynamic-b-tree-bit-vector Public
Forked from uulau/dynamic-b-tree-bit-vectorC++ UpdatedAug 20, 2019 -
2-SAT_to_reachibility Public
Solve a 2 SAT instance using the 2-coloring problem in Turingarena