maweigert
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trackastra Public
Forked from weigertlab/trackastraPython BSD 3-Clause "New" or "Revised" License UpdatedJan 3, 2025 -
betterplots Public
Some utilities to create better plots with seaborn
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gputools Public
GPU accelerated image/volume processing in Python
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stardist Public
Forked from stardist/stardistStarDist - Object Detection with Star-convex Shapes
Python BSD 3-Clause "New" or "Revised" License UpdatedSep 26, 2024 -
cellpose Public
Forked from MouseLand/cellposea generalist algorithm for cellular segmentation with human-in-the-loop capabilities
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedJul 10, 2024 -
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napari Public
Forked from napari/naparinapari: a fast, interactive, multi-dimensional image viewer for python
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traccuracy Public
Forked from Janelia-Trackathon-2023/traccuracyUtilities for computing common accuracy metrics on cell tracking challenge solutions with ground truth
Python Other UpdatedAug 24, 2023 -
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embo_2022 Public
CARE/Stardist tutorials for EMBO Practical Course — Computational optical biology 2022
Jupyter Notebook UpdatedOct 6, 2022 -
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backbones Public
Forked from bentaculum/backbonesCommon neural network architectures implemented in PyTorch
Python MIT License UpdatedMay 11, 2022 -
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training-resources Public
Forked from NEUBIAS/training-resourcesResources for teaching/preparing to teach bioimage analysis
ImageJ Macro Other UpdatedMar 2, 2022 -
napari-example-plugin-foofoo Public
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 2, 2022 -
01_intro_mldl Public
Forked from dl4mia/01_intro_mldlIntro exercise for ML and DL...
Jupyter Notebook UpdatedNov 21, 2021 -
dl-teaching-resources Public
Forked from constantinpape/dl-teaching-resourcesCollection of teaching material for deep learning for (biomedical) image analysis
Jupyter Notebook MIT License UpdatedNov 8, 2021 -
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imagej.github.io Public
Forked from imagej/imagej.github.ioGitHub Pages for ImageJ
JavaScript Other UpdatedJun 7, 2021 -
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magicgui Public
Forked from pyapp-kit/magicguibuild GUIs from python functions, using magic.
Python MIT License UpdatedMar 24, 2021 -
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teaching-dl-course-2020 Public
Forked from kreshuklab/teaching-dl-course-2020EMBL Deep Learning course 2020-21 exercises and materials
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pyopencl Public
Forked from inducer/pyopenclOpenCL integration for Python, plus shiny features
Python Other UpdatedSep 9, 2020