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mattreturn1/HMM-Bayes-NeuroABIDE

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Installation of the dependencies

  1. Clone the repository:
git clone https://github.com/mattreturn1/AI_project.git
  1. Download the library required
pip install -r requirements.txt
  1. The repository contains the already filtered folders.
    If you want to test the folders_organizer.py, you need to download abide.zip from the following link:

https://auckland.figshare.com/articles/dataset/NeurIPS_2022_Datasets/21397377

Then extract the contents of the abide.zip folder and rename the extracted folder to abide.
Move the renamed folder to the root folder of the project.

Executing the code

  1. Calculate the metrics with main.py, which must be done before the execution of the other programs.

  2. Then use Jupyter Notebook to execute bayesian_network.ipynb and hidden_markov_model.ipynb.

Dataset

This project uses the dataset:

Xu, Jiaxing; Yang, Yunhan; Huang, David; Gururajapathy, Sophi; Ke, Yiping; Qiao, Miao; et al. (2023).
A Collection of Brain Network Datasets. The University of Auckland. Dataset.
https://doi.org/10.17608/k6.auckland.21397377.v7

Licensed under Creative Commons Attribution 4.0 International (CC BY 4.0).