issue 878 partial fix

.gitattributes

@@ -0,0 +1,14 @@
+# Set the default behavior, in case people don't have core.autocrlf set.
+* text=auto
+
+# Explicitly declare text files you want to always be normalized and converted
+# to native line endings on checkout.
+*.c text
+*.h text
+
+# Declare files that will always have CRLF line endings on checkout.
+*.sln text eol=crlf
+
+# Denote all files that are truly binary and should not be modified.
+*.png binary
+*.jpg binary

.gitignore

@@ -1,18 +1,36 @@
+# Runtime artifacts
 /build
-*.eggs/
-*.pyc
 /src/_compress.c
+/tmp/
+*.pyc
 *.egg
 *.so
-*.egg-info
+*.sw[op]
+.cache
 
-# Coverage
-htmlcov
+# Coverage test artifacts
+/.run/
+htmlcov/
 .coverage
-.idea
-.cache
 coverage.xml
 junit.xml
-/tmp/
 
-*.sw[op]
+# PyCharm IDE
+/.idea/
+
+# Virtual Environments
+/.tox/
+/.venv/
+
+# Install Artifacts
+*.eggs/
+*.egg-info/
+
+# Benchmark Artifacts
+/asv/
+/.asv/
+
+# Setup Scripts
+get-pip.py
+setpath.sh
+clean_after_tox.sh

asv.conf.json

@@ -11,7 +11,7 @@
 
     // The URL or local path of the source code repository for the
     // project being benchmarked
-    "repo": "https://github.com/manahl/arctic",
+    "repo": ".",
 
     // List of branches to benchmark. If not provided, defaults to "master"
     // (for git) or "tip" (for mercurial).
@@ -31,17 +31,27 @@
     // variable.
     "environment_type": "virtualenv",
 
+    // timeout in seconds for installing any dependencies in environment
+    // defaults to 10 min
+    //"install_timeout": 600,
+
     // the base URL to show a commit for the project.
     "show_commit_url": "http://github.com/manahl/arctic/commit/",
 
     // The Pythons you'd like to test against.  If not provided, defaults
     // to the current version of Python used to run `asv`.
-    "pythons": ["2.7"],
+    "pythons": ["2.7", "3.6", "3.7"],
 
     // The matrix of dependencies to test.  Each key is the name of a
     // package (in PyPI) and the values are version numbers.  An empty
-    // list indicates to just test against the default (latest)
-    // version.
+    // list or empty string indicates to just test against the default
+    // (latest) version. null indicates that the package is to not be
+    // installed. If the package to be tested is only available from
+    // PyPi, and the 'environment_type' is conda, then you can preface
+    // the package name by 'pip+', and the package will be installed via
+    // pip (with all the conda available packages installed first,
+    // followed by the pip installed packages).
+    //
     "matrix": {
         "numpy": [],
         "Cython": [],
@@ -56,28 +66,73 @@
 	"tzlocal": []
     },
 
+    // Combinations of libraries/python versions can be excluded/included
+    // from the set to test. Each entry is a dictionary containing additional
+    // key-value pairs to include/exclude.
+    //
+    // An exclude entry excludes entries where all values match. The
+    // values are regexps that should match the whole string.
+    //
+    // An include entry adds an environment. Only the packages listed
+    // are installed. The 'python' key is required. The exclude rules
+    // do not apply to includes.
+    //
+    // In addition to package names, the following keys are available:
+    //
+    // - python
+    //     Python version, as in the *pythons* variable above.
+    // - environment_type
+    //     Environment type, as above.
+    // - sys_platform
+    //     Platform, as in sys.platform. Possible values for the common
+    //     cases: 'linux2', 'win32', 'cygwin', 'darwin'.
+    //
+    // "exclude": [
+    //     {"python": "3.2", "sys_platform": "win32"}, // skip py3.2 on windows
+    //     {"environment_type": "conda", "six": null}, // don't run without six on conda
+    // ],
+    //
+    // "include": [
+    //     // additional env for python2.7
+    //     {"python": "2.7", "numpy": "1.8"},
+    //     // additional env if run on windows+conda
+    //     {"platform": "win32", "environment_type": "conda", "python": "2.7", "libpython": ""},
+    // ],
+
     // The directory (relative to the current directory) that benchmarks are
     // stored in.  If not provided, defaults to "benchmarks"
     "benchmark_dir": "benchmarks",
 
     // The directory (relative to the current directory) to cache the Python
     // environments in.  If not provided, defaults to "env"
-    // "env_dir": "env",
-
+    "env_dir": ".asv/env",
 
     // The directory (relative to the current directory) that raw benchmark
     // results are stored in.  If not provided, defaults to "results".
-    // "results_dir": "results",
+    "results_dir": ".asv/results",
 
     // The directory (relative to the current directory) that the html tree
     // should be written to.  If not provided, defaults to "html".
-    // "html_dir": "html",
+    "html_dir": ".asv/html",
 
     // The number of characters to retain in the commit hashes.
     // "hash_length": 8,
 
     // `asv` will cache wheels of the recent builds in each
     // environment, making them faster to install next time.  This is
     // number of builds to keep, per environment.
-    // "wheel_cache_size": 0
+    // "build_cache_size": 0
+
+    // The commits after which the regression search in `asv publish`
+    // should start looking for regressions. Dictionary whose keys are
+    // regexps matching to benchmark names, and values corresponding to
+    // the commit (exclusive) after which to start looking for
+    // regressions.  The default is to start from the first commit
+    // with results. If the commit is `null`, regression detection is
+    // skipped for the matching benchmark.
+    //
+    // "regressions_first_commits": {
+    //    "some_benchmark": "352cdf",  // Consider regressions only after this commit
+    //    "another_benchmark": null,   // Skip regression detection altogether
+    // }
 }

benchmarks.md

@@ -1,3 +1,9 @@
 ## Arctic Benchmarks
 
-Benchmarks are located in the [benchmarks/](benchmarks/) directory. You must install [ASV](https://github.com/spacetelescope/asv/) to run the benchmarks. It can be installed with pip, or cloned from github and built locally (this is preferred).  A config file is provided as well [asv.conf.json](asv.conf.json). To run the benchmarks, simply run 'asv run'. More information on ASV is provided in their [documentation](http://asv.readthedocs.org/en/latest/using.html).
+Benchmarks are located in the [benchmarks/](benchmarks/) directory. You must 
+install [ASV](https://github.com/spacetelescope/asv/) to run the benchmarks. 
+It can be installed with pip, or cloned from github and built locally (this 
+is preferred).  A config file is provided as well [asv.conf.json](asv.conf.json). 
+To run the benchmarks, simply run 'asv run'. More information on ASV is 
+provided in their [documentation](http://asv.readthedocs.org/en/latest/using.html).
+

benchmarks/fast_serializable_check.py

@@ -1,5 +1,10 @@
 import time
 
+# FIXME: CM#013 - (asv unable to import tests module - add arctic proj root to path)
+import os.path
+import sys
+sys.path.append(os.path.join(os.path.dirname(__file__), '..'))
+
 import arctic.serialization.numpy_records as anr
 from tests.unit.serialization.serialization_test_data import _mixed_test_data as input_test_data