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fix: PyPI support for env update #3419

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merged 13 commits into from
Sep 5, 2024

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jjerphan
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@jjerphan jjerphan commented Aug 29, 2024

Completes #1455.

This factors the logic of the call to pip for the install and update path.

Note that previously the output of pip install was redirected up to the libmambapy helpers' outputs, breaking JSON outputs when --json is specify. The logging level aren't managing the standard output of subprocess for now, and doing this properly probably should be done in another PR. For now, we simply call pip in quiet mode.

@jjerphan jjerphan added the release::bug_fixes For PRs fixing bugs label Aug 29, 2024
@jjerphan jjerphan force-pushed the fix/pip-support-for-env-update branch from 4bc9e04 to 5e46173 Compare August 30, 2024 06:48
@jjerphan jjerphan marked this pull request as ready for review August 30, 2024 06:52
@jjerphan jjerphan force-pushed the fix/pip-support-for-env-update branch from b9cc118 to 6efaf64 Compare August 30, 2024 14:14
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@jjerphan jjerphan force-pushed the fix/pip-support-for-env-update branch from 6efaf64 to 42771f2 Compare August 30, 2024 14:55
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@Hind-M
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Hind-M commented Aug 30, 2024

Can we also add tests to make sure we are behaving like conda env update when mixing conda-forge and pip packages in both orders?

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@Hind-M Hind-M marked this pull request as draft September 4, 2024 16:03
jjerphan and others added 13 commits September 5, 2024 09:24
Signed-off-by: Julien Jerphanion <git@jjerphan.xyz>
Signed-off-by: Julien Jerphanion <git@jjerphan.xyz>
Signed-off-by: Julien Jerphanion <git@jjerphan.xyz>
Signed-off-by: Julien Jerphanion <git@jjerphan.xyz>
Signed-off-by: Julien Jerphanion <git@jjerphan.xyz>
Signed-off-by: Julien Jerphanion <git@jjerphan.xyz>

Co-authored-by: Johan Mabille <johan.mabille@gmail.com>
Signed-off-by: Julien Jerphanion <git@jjerphan.xyz>
Signed-off-by: Julien Jerphanion <git@jjerphan.xyz>

Co-authored-by: Hind Montassif <hind.montassif@gmail.com>
@Hind-M Hind-M force-pushed the fix/pip-support-for-env-update branch from 35a15d1 to 90ad1c3 Compare September 5, 2024 07:26
@Hind-M Hind-M marked this pull request as ready for review September 5, 2024 07:54
@JohanMabille JohanMabille merged commit c4a6e78 into mamba-org:main Sep 5, 2024
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@jjerphan jjerphan deleted the fix/pip-support-for-env-update branch September 5, 2024 13:47
@SylvainCorlay
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