try again

loculus-project · Oct 17, 2024 · da2e140 · da2e140
1 parent 42ec318
commit da2e140
Show file tree

Hide file tree

Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/ingest/Snakefile b/ingest/Snakefile
@@ -64,7 +64,7 @@ rule fetch_ncbi_dataset_package:
 rule format_ncbi_dataset_report:
     input:
         script="scripts/rename_fields.py",
-        dataset_package="results/ncbi_dataset",
+        dataset_package=directory("results/ncbi_dataset"),
         config="results/config.yaml",
     output:
         ncbi_dataset_tsv="results/metadata_post_rename.tsv",

diff --git a/ingest/tests/config_cchf/config.yaml b/ingest/tests/config_cchf/config.yaml
@@ -28,4 +28,4 @@ rename:
   ncbiSubmitterAffiliation: authorAffiliations
   ncbiSubmitterNames: authors
 taxon_id: 3052518
-check_ena_deposition: false
+check_ena_deposition: true