re-organizing repo

lnt28 · Mar 16, 2019 · eb8a5ac · eb8a5ac
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diff --git a/README.md b/README.md
@@ -1,6 +1,5 @@
 # mAP (mean Average Precision)
 
-[![New](https://img.shields.io/badge/2018-NEW-brightgreen.svg)](https://github.com/Cartucho/mAP/commits/master)
 [![GitHub stars](https://img.shields.io/github/stars/Cartucho/mAP.svg?style=social&label=Stars)](https://github.com/Cartucho/mAP)
 
 This code will evaluate the performance of your neural net for object recognition.
@@ -74,43 +73,44 @@ git clone https://github.com/Cartucho/mAP
 Step by step:
 
   1. [Create the ground-truth files](#create-the-ground-truth-files)
-  2. Move the ground-truth files into the folder **ground-truth/**
-  3. [Create the predicted objects files](#create-the-predicted-objects-files)
-  4. Move the predictions files into the folder **predicted/**
+  2. Copy the ground-truth files into the folder **input/ground-truth/**
+  3. [Create the detection-result files](#create-the-detection-result-files)
+  4. Copy the detection-result files into the folder **input/predicted/**
   5. Run the code:
          ```
          python main.py
          ```
 
 Optional (if you want to see the **animation**):
 
-  6. Insert the images into the folder **images/**
+  6. Insert the images into the folder **input/images/**
 
 
 #### PASCAL VOC, Darkflow and YOLO users
 
-In the [extra](https://github.com/Cartucho/mAP/tree/master/extra) folder you can find additional scripts to convert **PASCAL VOC**, **darkflow** and **YOLO** files into the required format.
+In the [scripts/extra](https://github.com/Cartucho/mAP/tree/master/scripts/extra) folder you can find additional scripts to convert **PASCAL VOC**, **darkflow** and **YOLO** files into the required format.
 
 #### Create the ground-truth files
 
 - Create a separate ground-truth text file for each image.
-- Use **matching names** (e.g. image: "image_1.jpg", ground-truth: "image_1.txt"; "image_2.jpg", "image_2.txt"...).
+- Use **matching names** for the files (e.g. image: "image_1.jpg", ground-truth: "image_1.txt").
 - In these files, each line should be in the following format:
     ```
     <class_name> <left> <top> <right> <bottom> [<difficult>]
     ```
-- The `difficult` parameter is optional, use it if you want to ignore a specific prediction.
+- The `difficult` parameter is optional, use it if you want the calculation to ignore a specific detection.
 - E.g. "image_1.txt":
     ```
     tvmonitor 2 10 173 238
     book 439 157 556 241
     book 437 246 518 351 difficult
     pottedplant 272 190 316 259
     ```
-#### Create the predicted objects files
 
-- Create a separate predicted objects text file for each image.
-- Use **matching names** (e.g. image: "image_1.jpg", predicted: "image_1.txt"; "image_2.jpg", "image_2.txt"...).
+#### Create the detection-result files
+
+- Create a separate detection-result text file for each image.
+- Use **matching names** for the files (e.g. image: "image_1.jpg", detection-result: "image_1.txt").
 - In these files, each line should be in the following format:
     ```
     <class_name> <confidence> <left> <top> <right> <bottom>

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diff --git a/images/2007_000733.jpg → input/images/2007_000733.jpg b/images/2007_000733.jpg → input/images/2007_000733.jpg
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diff --git a/images/2007_000762.jpg → input/images/2007_000762.jpg b/images/2007_000762.jpg → input/images/2007_000762.jpg
diff --git a/images/2007_000768.jpg → input/images/2007_000768.jpg b/images/2007_000768.jpg → input/images/2007_000768.jpg
diff --git a/images/2007_000783.jpg → input/images/2007_000783.jpg b/images/2007_000783.jpg → input/images/2007_000783.jpg
diff --git a/images/2007_000793.jpg → input/images/2007_000793.jpg b/images/2007_000793.jpg → input/images/2007_000793.jpg
diff --git a/images/2007_000799.jpg → input/images/2007_000799.jpg b/images/2007_000799.jpg → input/images/2007_000799.jpg
diff --git a/images/2007_000804.jpg → input/images/2007_000804.jpg b/images/2007_000804.jpg → input/images/2007_000804.jpg
diff --git a/images/2007_000807.jpg → input/images/2007_000807.jpg b/images/2007_000807.jpg → input/images/2007_000807.jpg
diff --git a/images/2007_000822.jpg → input/images/2007_000822.jpg b/images/2007_000822.jpg → input/images/2007_000822.jpg
diff --git a/images/2007_000830.jpg → input/images/2007_000830.jpg b/images/2007_000830.jpg → input/images/2007_000830.jpg
diff --git a/images/2007_000836.jpg → input/images/2007_000836.jpg b/images/2007_000836.jpg → input/images/2007_000836.jpg
diff --git a/images/2007_000837.jpg → input/images/2007_000837.jpg b/images/2007_000837.jpg → input/images/2007_000837.jpg
diff --git a/images/2007_000847.jpg → input/images/2007_000847.jpg b/images/2007_000847.jpg → input/images/2007_000847.jpg
diff --git a/images/2007_000862.jpg → input/images/2007_000862.jpg b/images/2007_000862.jpg → input/images/2007_000862.jpg
diff --git a/images/2007_000876.jpg → input/images/2007_000876.jpg b/images/2007_000876.jpg → input/images/2007_000876.jpg
diff --git a/images/2007_000904.jpg → input/images/2007_000904.jpg b/images/2007_000904.jpg → input/images/2007_000904.jpg
diff --git a/images/2007_000999.jpg → input/images/2007_000999.jpg b/images/2007_000999.jpg → input/images/2007_000999.jpg
diff --git a/images/2007_001073.jpg → input/images/2007_001073.jpg b/images/2007_001073.jpg → input/images/2007_001073.jpg
diff --git a/images/2007_001154.jpg → input/images/2007_001154.jpg b/images/2007_001154.jpg → input/images/2007_001154.jpg
diff --git a/images/2007_001175.jpg → input/images/2007_001175.jpg b/images/2007_001175.jpg → input/images/2007_001175.jpg
diff --git a/images/2007_001185.jpg → input/images/2007_001185.jpg b/images/2007_001185.jpg → input/images/2007_001185.jpg
diff --git a/images/2007_001225.jpg → input/images/2007_001225.jpg b/images/2007_001225.jpg → input/images/2007_001225.jpg
diff --git a/images/2007_001239.jpg → input/images/2007_001239.jpg b/images/2007_001239.jpg → input/images/2007_001239.jpg
diff --git a/images/2007_001284.jpg → input/images/2007_001284.jpg b/images/2007_001284.jpg → input/images/2007_001284.jpg
diff --git a/images/2007_001288.jpg → input/images/2007_001288.jpg b/images/2007_001288.jpg → input/images/2007_001288.jpg
diff --git a/images/2007_001289.jpg → input/images/2007_001289.jpg b/images/2007_001289.jpg → input/images/2007_001289.jpg
diff --git a/images/2007_001299.jpg → input/images/2007_001299.jpg b/images/2007_001299.jpg → input/images/2007_001299.jpg
diff --git a/images/2007_001311.jpg → input/images/2007_001311.jpg b/images/2007_001311.jpg → input/images/2007_001311.jpg
diff --git a/images/2007_001321.jpg → input/images/2007_001321.jpg b/images/2007_001321.jpg → input/images/2007_001321.jpg
diff --git a/images/2007_001340.jpg → input/images/2007_001340.jpg b/images/2007_001340.jpg → input/images/2007_001340.jpg
diff --git a/images/2007_001377.jpg → input/images/2007_001377.jpg b/images/2007_001377.jpg → input/images/2007_001377.jpg
diff --git a/images/2007_001397.jpg → input/images/2007_001397.jpg b/images/2007_001397.jpg → input/images/2007_001397.jpg
diff --git a/images/2007_001408.jpg → input/images/2007_001408.jpg b/images/2007_001408.jpg → input/images/2007_001408.jpg
diff --git a/images/2007_001416.jpg → input/images/2007_001416.jpg b/images/2007_001416.jpg → input/images/2007_001416.jpg
diff --git a/predicted/2007_000027.txt → input/predicted/2007_000027.txt b/predicted/2007_000027.txt → input/predicted/2007_000027.txt
diff --git a/predicted/2007_000032.txt → input/predicted/2007_000032.txt b/predicted/2007_000032.txt → input/predicted/2007_000032.txt
diff --git a/predicted/2007_000033.txt → input/predicted/2007_000033.txt b/predicted/2007_000033.txt → input/predicted/2007_000033.txt
diff --git a/predicted/2007_000039.txt → input/predicted/2007_000039.txt b/predicted/2007_000039.txt → input/predicted/2007_000039.txt
diff --git a/predicted/2007_000042.txt → input/predicted/2007_000042.txt b/predicted/2007_000042.txt → input/predicted/2007_000042.txt
diff --git a/predicted/2007_000061.txt → input/predicted/2007_000061.txt b/predicted/2007_000061.txt → input/predicted/2007_000061.txt
diff --git a/predicted/2007_000063.txt → input/predicted/2007_000063.txt b/predicted/2007_000063.txt → input/predicted/2007_000063.txt
diff --git a/predicted/2007_000068.txt → input/predicted/2007_000068.txt b/predicted/2007_000068.txt → input/predicted/2007_000068.txt
diff --git a/predicted/2007_000121.txt → input/predicted/2007_000121.txt b/predicted/2007_000121.txt → input/predicted/2007_000121.txt
diff --git a/predicted/2007_000123.txt → input/predicted/2007_000123.txt b/predicted/2007_000123.txt → input/predicted/2007_000123.txt
diff --git a/predicted/2007_000129.txt → input/predicted/2007_000129.txt b/predicted/2007_000129.txt → input/predicted/2007_000129.txt
diff --git a/predicted/2007_000170.txt → input/predicted/2007_000170.txt b/predicted/2007_000170.txt → input/predicted/2007_000170.txt
diff --git a/predicted/2007_000175.txt → input/predicted/2007_000175.txt b/predicted/2007_000175.txt → input/predicted/2007_000175.txt
diff --git a/predicted/2007_000187.txt → input/predicted/2007_000187.txt b/predicted/2007_000187.txt → input/predicted/2007_000187.txt
diff --git a/predicted/2007_000241.txt → input/predicted/2007_000241.txt b/predicted/2007_000241.txt → input/predicted/2007_000241.txt
diff --git a/predicted/2007_000243.txt → input/predicted/2007_000243.txt b/predicted/2007_000243.txt → input/predicted/2007_000243.txt
diff --git a/predicted/2007_000250.txt → input/predicted/2007_000250.txt b/predicted/2007_000250.txt → input/predicted/2007_000250.txt
diff --git a/predicted/2007_000256.txt → input/predicted/2007_000256.txt b/predicted/2007_000256.txt → input/predicted/2007_000256.txt
diff --git a/predicted/2007_000272.txt → input/predicted/2007_000272.txt b/predicted/2007_000272.txt → input/predicted/2007_000272.txt
diff --git a/predicted/2007_000323.txt → input/predicted/2007_000323.txt b/predicted/2007_000323.txt → input/predicted/2007_000323.txt
diff --git a/predicted/2007_000332.txt → input/predicted/2007_000332.txt b/predicted/2007_000332.txt → input/predicted/2007_000332.txt
diff --git a/predicted/2007_000333.txt → input/predicted/2007_000333.txt b/predicted/2007_000333.txt → input/predicted/2007_000333.txt
diff --git a/predicted/2007_000346.txt → input/predicted/2007_000346.txt b/predicted/2007_000346.txt → input/predicted/2007_000346.txt
diff --git a/predicted/2007_000363.txt → input/predicted/2007_000363.txt b/predicted/2007_000363.txt → input/predicted/2007_000363.txt
diff --git a/predicted/2007_000364.txt → input/predicted/2007_000364.txt b/predicted/2007_000364.txt → input/predicted/2007_000364.txt
diff --git a/predicted/2007_000392.txt → input/predicted/2007_000392.txt b/predicted/2007_000392.txt → input/predicted/2007_000392.txt
diff --git a/predicted/2007_000423.txt → input/predicted/2007_000423.txt b/predicted/2007_000423.txt → input/predicted/2007_000423.txt
diff --git a/predicted/2007_000452.txt → input/predicted/2007_000452.txt b/predicted/2007_000452.txt → input/predicted/2007_000452.txt
diff --git a/predicted/2007_000464.txt → input/predicted/2007_000464.txt b/predicted/2007_000464.txt → input/predicted/2007_000464.txt
diff --git a/predicted/2007_000480.txt → input/predicted/2007_000480.txt b/predicted/2007_000480.txt → input/predicted/2007_000480.txt
diff --git a/predicted/2007_000491.txt → input/predicted/2007_000491.txt b/predicted/2007_000491.txt → input/predicted/2007_000491.txt
diff --git a/predicted/2007_000504.txt → input/predicted/2007_000504.txt b/predicted/2007_000504.txt → input/predicted/2007_000504.txt
diff --git a/predicted/2007_000515.txt → input/predicted/2007_000515.txt b/predicted/2007_000515.txt → input/predicted/2007_000515.txt
diff --git a/predicted/2007_000528.txt → input/predicted/2007_000528.txt b/predicted/2007_000528.txt → input/predicted/2007_000528.txt
diff --git a/predicted/2007_000529.txt → input/predicted/2007_000529.txt b/predicted/2007_000529.txt → input/predicted/2007_000529.txt
diff --git a/predicted/2007_000549.txt → input/predicted/2007_000549.txt b/predicted/2007_000549.txt → input/predicted/2007_000549.txt
diff --git a/predicted/2007_000559.txt → input/predicted/2007_000559.txt b/predicted/2007_000559.txt → input/predicted/2007_000559.txt
diff --git a/predicted/2007_000572.txt → input/predicted/2007_000572.txt b/predicted/2007_000572.txt → input/predicted/2007_000572.txt
diff --git a/predicted/2007_000584.txt → input/predicted/2007_000584.txt b/predicted/2007_000584.txt → input/predicted/2007_000584.txt
diff --git a/predicted/2007_000629.txt → input/predicted/2007_000629.txt b/predicted/2007_000629.txt → input/predicted/2007_000629.txt
diff --git a/predicted/2007_000636.txt → input/predicted/2007_000636.txt b/predicted/2007_000636.txt → input/predicted/2007_000636.txt
diff --git a/predicted/2007_000645.txt → input/predicted/2007_000645.txt b/predicted/2007_000645.txt → input/predicted/2007_000645.txt
diff --git a/predicted/2007_000648.txt → input/predicted/2007_000648.txt b/predicted/2007_000648.txt → input/predicted/2007_000648.txt
diff --git a/predicted/2007_000661.txt → input/predicted/2007_000661.txt b/predicted/2007_000661.txt → input/predicted/2007_000661.txt
diff --git a/predicted/2007_000663.txt → input/predicted/2007_000663.txt b/predicted/2007_000663.txt → input/predicted/2007_000663.txt
diff --git a/predicted/2007_000664.txt → input/predicted/2007_000664.txt b/predicted/2007_000664.txt → input/predicted/2007_000664.txt
diff --git a/predicted/2007_000676.txt → input/predicted/2007_000676.txt b/predicted/2007_000676.txt → input/predicted/2007_000676.txt
diff --git a/predicted/2007_000713.txt → input/predicted/2007_000713.txt b/predicted/2007_000713.txt → input/predicted/2007_000713.txt
diff --git a/predicted/2007_000720.txt → input/predicted/2007_000720.txt b/predicted/2007_000720.txt → input/predicted/2007_000720.txt
diff --git a/predicted/2007_000727.txt → input/predicted/2007_000727.txt b/predicted/2007_000727.txt → input/predicted/2007_000727.txt
diff --git a/predicted/2007_000733.txt → input/predicted/2007_000733.txt b/predicted/2007_000733.txt → input/predicted/2007_000733.txt
diff --git a/predicted/2007_000738.txt → input/predicted/2007_000738.txt b/predicted/2007_000738.txt → input/predicted/2007_000738.txt
diff --git a/predicted/2007_000762.txt → input/predicted/2007_000762.txt b/predicted/2007_000762.txt → input/predicted/2007_000762.txt
diff --git a/predicted/2007_000768.txt → input/predicted/2007_000768.txt b/predicted/2007_000768.txt → input/predicted/2007_000768.txt
diff --git a/predicted/2007_000783.txt → input/predicted/2007_000783.txt b/predicted/2007_000783.txt → input/predicted/2007_000783.txt
diff --git a/predicted/2007_000793.txt → input/predicted/2007_000793.txt b/predicted/2007_000793.txt → input/predicted/2007_000793.txt
diff --git a/predicted/2007_000799.txt → input/predicted/2007_000799.txt b/predicted/2007_000799.txt → input/predicted/2007_000799.txt
diff --git a/predicted/2007_000804.txt → input/predicted/2007_000804.txt b/predicted/2007_000804.txt → input/predicted/2007_000804.txt
diff --git a/predicted/2007_000807.txt → input/predicted/2007_000807.txt b/predicted/2007_000807.txt → input/predicted/2007_000807.txt
diff --git a/predicted/2007_000822.txt → input/predicted/2007_000822.txt b/predicted/2007_000822.txt → input/predicted/2007_000822.txt
diff --git a/predicted/2007_000830.txt → input/predicted/2007_000830.txt b/predicted/2007_000830.txt → input/predicted/2007_000830.txt
diff --git a/predicted/2007_000836.txt → input/predicted/2007_000836.txt b/predicted/2007_000836.txt → input/predicted/2007_000836.txt
diff --git a/predicted/2007_000837.txt → input/predicted/2007_000837.txt b/predicted/2007_000837.txt → input/predicted/2007_000837.txt
diff --git a/predicted/2007_000847.txt → input/predicted/2007_000847.txt b/predicted/2007_000847.txt → input/predicted/2007_000847.txt
diff --git a/predicted/2007_000862.txt → input/predicted/2007_000862.txt b/predicted/2007_000862.txt → input/predicted/2007_000862.txt
diff --git a/predicted/2007_000876.txt → input/predicted/2007_000876.txt b/predicted/2007_000876.txt → input/predicted/2007_000876.txt
diff --git a/predicted/2007_000904.txt → input/predicted/2007_000904.txt b/predicted/2007_000904.txt → input/predicted/2007_000904.txt
diff --git a/predicted/2007_000999.txt → input/predicted/2007_000999.txt b/predicted/2007_000999.txt → input/predicted/2007_000999.txt
diff --git a/predicted/2007_001073.txt → input/predicted/2007_001073.txt b/predicted/2007_001073.txt → input/predicted/2007_001073.txt
diff --git a/predicted/2007_001154.txt → input/predicted/2007_001154.txt b/predicted/2007_001154.txt → input/predicted/2007_001154.txt
diff --git a/predicted/2007_001175.txt → input/predicted/2007_001175.txt b/predicted/2007_001175.txt → input/predicted/2007_001175.txt
diff --git a/predicted/2007_001185.txt → input/predicted/2007_001185.txt b/predicted/2007_001185.txt → input/predicted/2007_001185.txt
diff --git a/predicted/2007_001225.txt → input/predicted/2007_001225.txt b/predicted/2007_001225.txt → input/predicted/2007_001225.txt
diff --git a/predicted/2007_001239.txt → input/predicted/2007_001239.txt b/predicted/2007_001239.txt → input/predicted/2007_001239.txt
diff --git a/predicted/2007_001284.txt → input/predicted/2007_001284.txt b/predicted/2007_001284.txt → input/predicted/2007_001284.txt
diff --git a/predicted/2007_001288.txt → input/predicted/2007_001288.txt b/predicted/2007_001288.txt → input/predicted/2007_001288.txt
diff --git a/predicted/2007_001289.txt → input/predicted/2007_001289.txt b/predicted/2007_001289.txt → input/predicted/2007_001289.txt
diff --git a/predicted/2007_001299.txt → input/predicted/2007_001299.txt b/predicted/2007_001299.txt → input/predicted/2007_001299.txt
diff --git a/predicted/2007_001311.txt → input/predicted/2007_001311.txt b/predicted/2007_001311.txt → input/predicted/2007_001311.txt
diff --git a/predicted/2007_001321.txt → input/predicted/2007_001321.txt b/predicted/2007_001321.txt → input/predicted/2007_001321.txt
diff --git a/predicted/2007_001340.txt → input/predicted/2007_001340.txt b/predicted/2007_001340.txt → input/predicted/2007_001340.txt
diff --git a/predicted/2007_001377.txt → input/predicted/2007_001377.txt b/predicted/2007_001377.txt → input/predicted/2007_001377.txt
diff --git a/predicted/2007_001397.txt → input/predicted/2007_001397.txt b/predicted/2007_001397.txt → input/predicted/2007_001397.txt
diff --git a/predicted/2007_001408.txt → input/predicted/2007_001408.txt b/predicted/2007_001408.txt → input/predicted/2007_001408.txt
diff --git a/predicted/2007_001416.txt → input/predicted/2007_001416.txt b/predicted/2007_001416.txt → input/predicted/2007_001416.txt
diff --git a/main.py b/main.py
@@ -21,6 +21,18 @@
 parser.add_argument('--set-class-iou', nargs='+', type=str, help="set IoU for a specific class.")
 args = parser.parse_args()
 
+'''
+    0,0 ------> x (width)
+     |
+     |  (Left,Top)
+     |      *_________
+     |      |         |
+            |         |
+     y      |_________|
+  (height)            *
+                (Right,Bottom)
+'''
+
 # if there are no classes to ignore then replace None by empty list
 if args.ignore is None:
     args.ignore = []
@@ -29,10 +41,15 @@
 if args.set_class_iou is not None:
     specific_iou_flagged = True
 
+# make sure that the cwd() is the location of the python script (so that every path makes sense)
+os.chdir(os.path.dirname(os.path.abspath(__file__)))
+
+GT_PATH = os.path.join(os.getcwd(), 'input', 'ground-truth')
+DR_PATH = os.path.join(os.getcwd(), 'input', 'predicted')
 # if there are no images then no animation can be shown
-img_path = 'images'
-if os.path.exists(img_path): 
-    for dirpath, dirnames, files in os.walk(img_path):
+IMG_PATH = os.path.join(os.getcwd(), 'input', 'images')
+if os.path.exists(IMG_PATH): 
+    for dirpath, dirnames, files in os.walk(IMG_PATH):
         if not files:
             # no image files found
             args.no_animation = True
@@ -337,7 +354,7 @@ def draw_plot_func(dictionary, n_classes, window_title, plot_title, x_label, out
      Create a list of all the class names present in the ground-truth (gt_classes).
 """
 # get a list with the ground-truth files
-ground_truth_files_list = glob.glob('ground-truth/*.txt')
+ground_truth_files_list = glob.glob(GT_PATH + '/*.txt')
 if len(ground_truth_files_list) == 0:
     error("Error: No ground-truth files found!")
 ground_truth_files_list.sort()
@@ -347,11 +364,12 @@ def draw_plot_func(dictionary, n_classes, window_title, plot_title, x_label, out
 
 for txt_file in ground_truth_files_list:
     #print(txt_file)
-    file_id = txt_file.split(".txt",1)[0]
+    file_id = txt_file.split(".txt", 1)[0]
     file_id = os.path.basename(os.path.normpath(file_id))
     # check if there is a correspondent predicted objects file
-    if not os.path.exists('predicted/' + file_id + ".txt"):
-        error_msg = "Error. File not found: predicted/" + file_id + ".txt\n"
+    temp_path = os.path.join(DR_PATH, (file_id + ".txt"))
+    if not os.path.exists(temp_path):
+        error_msg = "Error. File not found: {}\n".format(temp_path)
         error_msg += "(You can avoid this error message by running extra/intersect-gt-and-pred.py)"
         error(error_msg)
     lines_list = file_lines_to_list(txt_file)
@@ -438,7 +456,7 @@ def draw_plot_func(dictionary, n_classes, window_title, plot_title, x_label, out
      Load each of the predicted files into a temporary ".json" file.
 """
 # get a list with the predicted files
-predicted_files_list = glob.glob('predicted/*.txt')
+predicted_files_list = glob.glob(DR_PATH + '/*.txt')
 predicted_files_list.sort()
 
 for class_index, class_name in enumerate(gt_classes):
@@ -448,9 +466,10 @@ def draw_plot_func(dictionary, n_classes, window_title, plot_title, x_label, out
         # the first time it checks if all the corresponding ground-truth files exist
         file_id = txt_file.split(".txt",1)[0]
         file_id = os.path.basename(os.path.normpath(file_id))
+        temp_path = os.path.join(GT_PATH, (file_id + ".txt"))
         if class_index == 0:
-            if not os.path.exists('ground-truth/' + file_id + ".txt"):
-                error_msg = "Error. File not found: ground-truth/" +    file_id + ".txt\n"
+            if not os.path.exists(temp_path):
+                error_msg = "Error. File not found: {}\n".format(temp_path)
                 error_msg += "(You can avoid this error message by running extra/intersect-gt-and-pred.py)"
                 error(error_msg)
         lines = file_lines_to_list(txt_file)
@@ -500,16 +519,16 @@ def draw_plot_func(dictionary, n_classes, window_title, plot_title, x_label, out
             file_id = prediction["file_id"]
             if show_animation:
                 # find ground truth image
-                ground_truth_img = glob.glob1(img_path, file_id + ".*")
+                ground_truth_img = glob.glob1(IMG_PATH, file_id + ".*")
                 #tifCounter = len(glob.glob1(myPath,"*.tif"))
                 if len(ground_truth_img) == 0:
                     error("Error. Image not found with id: " + file_id)
                 elif len(ground_truth_img) > 1:
                     error("Error. Multiple image with id: " + file_id)
                 else: # found image
-                    #print(img_path + "/" + ground_truth_img[0])
+                    #print(IMG_PATH + "/" + ground_truth_img[0])
                     # Load image
-                    img = cv2.imread(img_path + "/" + ground_truth_img[0])
+                    img = cv2.imread(IMG_PATH + "/" + ground_truth_img[0])
                     # load image with draws of multiple detections
                     img_cumulative_path = results_files_path + "/images/" + ground_truth_img[0]
                     if os.path.isfile(img_cumulative_path):

diff --git a/extra/README.md → scripts/extra/README.md b/extra/README.md → scripts/extra/README.md
diff --git a/extra/class_list.txt → scripts/extra/class_list.txt b/extra/class_list.txt → scripts/extra/class_list.txt
diff --git a/extra/convert_gt_xml.py → scripts/extra/convert_gt_xml.py b/extra/convert_gt_xml.py → scripts/extra/convert_gt_xml.py
@@ -3,11 +3,15 @@
 import glob
 import xml.etree.ElementTree as ET
 
+# make sure that the cwd() in the beginning is the location of the python script (so that every path makes sense)
+os.chdir(os.path.dirname(os.path.abspath(__file__)))
 
 # change directory to the one with the files to be changed
-path_to_folder = '../ground-truth'
-#print(path_to_folder)
-os.chdir(path_to_folder)
+parent_path = os.path.abspath(os.path.join(os.getcwd(), os.pardir))
+parent_path = os.path.abspath(os.path.join(parent_path, os.pardir))
+GT_PATH = os.path.join(parent_path, 'input','ground-truth')
+#print(GT_PATH)
+os.chdir(GT_PATH)
 
 # old files (xml format) will be moved to a "backup" folder
 ## create the backup dir if it doesn't exist already
@@ -33,5 +37,5 @@
       bottom = bndbox.find('ymax').text
       new_f.write("%s %s %s %s %s\n" % (obj_name, left, top, right, bottom))
   # 2. move old file (xml format) to backup
-  os.rename(tmp_file, "backup/" + tmp_file)
+  os.rename(tmp_file, os.path.join(backup, tmp_file))
 print("Conversion completed!")
diff --git a/extra/convert_gt_yolo.py → scripts/extra/convert_gt_yolo.py b/extra/convert_gt_yolo.py → scripts/extra/convert_gt_yolo.py
@@ -3,7 +3,6 @@
 import glob
 import cv2
 
-
 def convert_yolo_coordinates_to_voc(x_c_n, y_c_n, width_n, height_n, img_width, img_height):
   ## remove normalization given the size of the image
   x_c = float(x_c_n) * img_width
@@ -21,6 +20,9 @@ def convert_yolo_coordinates_to_voc(x_c_n, y_c_n, width_n, height_n, img_width,
   bottom = int(y_c + half_height) + 1
   return left, top, right, bottom
 
+# make sure that the cwd() in the beginning is the location of the python script (so that every path makes sense)
+os.chdir(os.path.dirname(os.path.abspath(__file__)))
+
 # read the class_list.txt to a list
 with open("class_list.txt") as f:
   obj_list = f.readlines()
@@ -30,9 +32,11 @@ def convert_yolo_coordinates_to_voc(x_c_n, y_c_n, width_n, height_n, img_width,
 #print(obj_list[0])
 
 # change directory to the one with the files to be changed
-path_to_folder = '../ground-truth'
-#print(path_to_folder)
-os.chdir(path_to_folder)
+parent_path = os.path.abspath(os.path.join(os.getcwd(), os.pardir))
+parent_path = os.path.abspath(os.path.join(parent_path, os.pardir))
+GT_PATH = os.path.join(parent_path, 'input','ground-truth')
+#print(GT_PATH)
+os.chdir(GT_PATH)
 
 # old files (YOLO format) will be moved to a new folder (backup/)
 ## create the backup dir if it doesn't exist already

diff --git a/extra/convert_keras-yolo3.py → scripts/extra/convert_keras-yolo3.py b/extra/convert_keras-yolo3.py → scripts/extra/convert_keras-yolo3.py
diff --git a/extra/convert_pred_darkflow_json.py → scripts/extra/convert_pred_darkflow_json.py b/extra/convert_pred_darkflow_json.py → scripts/extra/convert_pred_darkflow_json.py
@@ -3,11 +3,15 @@
 import glob
 import json
 
+# make sure that the cwd() in the beginning is the location of the python script (so that every path makes sense)
+os.chdir(os.path.dirname(os.path.abspath(__file__)))
 
 # change directory to the one with the files to be changed
-path_to_folder = '../predicted'
-#print(path_to_folder)
-os.chdir(path_to_folder)
+parent_path = os.path.abspath(os.path.join(os.getcwd(), os.pardir))
+parent_path = os.path.abspath(os.path.join(parent_path, os.pardir))
+DR_PATH = os.path.join(parent_path, 'input','predicted')
+#print(DR_PATH)
+os.chdir(DR_PATH)
 
 # old files (darkflow json format) will be moved to a "backup" folder
 ## create the backup dir if it doesn't exist already

diff --git a/extra/convert_pred_yolo.py → scripts/extra/convert_pred_yolo.py b/extra/convert_pred_yolo.py → scripts/extra/convert_pred_yolo.py
@@ -1,8 +1,17 @@
 import os
 import re
 
+# make sure that the cwd() in the beginning is the location of the python script (so that every path makes sense)
+os.chdir(os.path.dirname(os.path.abspath(__file__)))
+
 IN_FILE = 'result.txt'
-OUTPUT_DIR = os.path.join('..', 'predicted')
+
+# change directory to the one with the files to be changed
+parent_path = os.path.abspath(os.path.join(os.getcwd(), os.pardir))
+parent_path = os.path.abspath(os.path.join(parent_path, os.pardir))
+DR_PATH = os.path.join(parent_path, 'input','predicted')
+#print(DR_PATH)
+os.chdir(DR_PATH)
 
 SEPARATOR_KEY = 'Enter Image Path:'
 IMG_FORMAT = '.jpg'
@@ -22,7 +31,7 @@
             if outfile is not None:
                 outfile.close()
             # open a new file
-            outfile = open(os.path.join(OUTPUT_DIR, image_name + '.txt'), 'w')
+            outfile = open(os.path.join(DR_PATH, image_name + '.txt'), 'w')
         elif outfile is not None:
             # split line on first occurrence of the character ':' and '%'
             class_name, info = line.split(':', 1)

diff --git a/extra/find_class.py → scripts/extra/find_class.py b/extra/find_class.py → scripts/extra/find_class.py
@@ -2,6 +2,9 @@
 import os
 import glob
 
+# make sure that the cwd() in the beginning is the location of the python script (so that every path makes sense)
+os.chdir(os.path.dirname(os.path.abspath(__file__)))
+
 if len(sys.argv) != 2:
   print("Error: wrong format.\nUsage: python find_class.py [class_name]")
   sys.exit(0)
@@ -29,9 +32,14 @@ def find_class(class_name):
   if not file_found:
     print(" No file found with that class")
 
+parent_path = os.path.abspath(os.path.join(os.getcwd(), os.pardir))
+parent_path = os.path.abspath(os.path.join(parent_path, os.pardir))
+GT_PATH = os.path.join(parent_path, 'input','ground-truth')
+DR_PATH = os.path.join(parent_path, 'input','predicted')
+
 print("Ground-Truth folder:")
-os.chdir("../ground-truth")
+os.chdir(GT_PATH)
 find_class(searching_class_name)
 print("\nPredicted folder:")
-os.chdir("../predicted")
+os.chdir(DR_PATH)
 find_class(searching_class_name)
diff --git a/extra/intersect-gt-and-pred.py → scripts/extra/intersect-gt-and-pred.py b/extra/intersect-gt-and-pred.py → scripts/extra/intersect-gt-and-pred.py
@@ -9,20 +9,26 @@
 ## not in the intersection into a backup folder (backup_no_matches_found).
 ## This will retain only files that have the same name in both folders.
 
-# change directory to the one with the files to be changed
-path_to_gt = '../ground-truth'
-path_to_pred = '../predicted'
+
+# make sure that the cwd() in the beginning is the location of the python script (so that every path makes sense)
+os.chdir(os.path.dirname(os.path.abspath(__file__)))
+
+parent_path = os.path.abspath(os.path.join(os.getcwd(), os.pardir))
+parent_path = os.path.abspath(os.path.join(parent_path, os.pardir))
+GT_PATH = os.path.join(parent_path, 'input','ground-truth')
+DR_PATH = os.path.join(parent_path, 'input','predicted')
+
 backup_folder = 'backup_no_matches_found' # must end without slash
 
-os.chdir(path_to_gt)
+os.chdir(GT_PATH)
 gt_files = glob.glob('*.txt')
 if len(gt_files) == 0:
-    print("Error: no .txt files found in", path_to_gt)
+    print("Error: no .txt files found in", GT_PATH)
     sys.exit()
-os.chdir(path_to_pred)
+os.chdir(DR_PATH)
 pred_files = glob.glob('*.txt')
 if len(pred_files) == 0:
-    print("Error: no .txt files found in", path_to_pred)
+    print("Error: no .txt files found in", DR_PATH)
     sys.exit()
 
 gt_files = set(gt_files)
@@ -46,8 +52,8 @@ def backup(src_folder, backup_files, backup_folder):
     for file in backup_files:
         os.rename(file, backup_folder + '/' + file)
 
-backup(path_to_gt, gt_backup, backup_folder)
-backup(path_to_pred, pred_backup, backup_folder)
+backup(GT_PATH, gt_backup, backup_folder)
+backup(DR_PATH, pred_backup, backup_folder)
 if gt_backup:
     print('total ground-truth backup files:', len(gt_backup))
 if pred_backup:

diff --git a/extra/remove_class.py → scripts/extra/remove_class.py b/extra/remove_class.py → scripts/extra/remove_class.py
diff --git a/extra/remove_delimiter_char.py → scripts/extra/remove_delimiter_char.py b/extra/remove_delimiter_char.py → scripts/extra/remove_delimiter_char.py
diff --git a/extra/remove_space.py → scripts/extra/remove_space.py b/extra/remove_space.py → scripts/extra/remove_space.py
diff --git a/extra/rename_class.py → scripts/extra/rename_class.py b/extra/rename_class.py → scripts/extra/rename_class.py
diff --git a/extra/result.txt → scripts/extra/result.txt b/extra/result.txt → scripts/extra/result.txt