RAG inference tutorial #126

	name: linkml-store QC

	on:
	push:
	branches: [ main ]
	pull_request:
	branches: [ main ]

	jobs:
	build:
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: [ "3.8", "3.11" ]
	mongodb-version: ['7.0']

	steps:
	- uses: actions/checkout@v3.0.2

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v3
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install Poetry
	uses: snok/install-poetry@v1.3.1

	- name: Install dependencies
	run: poetry install --no-interaction --all-extras

	- name: Check common spelling errors
	run: poetry run tox -e codespell

	- name: Check code quality with flake8
	run: poetry run tox -e lint

	- name: Start MongoDB
	uses: supercharge/mongodb-github-action@1.11.0
	with:
	mongodb-version: ${{ matrix.mongodb-version }}

	- name: Test with pytest and generate coverage file
	run: poetry run pytest -m "not integration and not neo4j" --ignore=src/linkml_store/inference/implementations/rag_inference_engine.py

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