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Merge updates for zarr completion & doi completion upstream in dandi cli #55
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…di-archive With current release of dandi-schema our testing starts to fail, but dandi-archive seems needing CI fixing first to also make upgrade possible. So as a quick resolution to avoid ill effects on users etc, I think we should restrict version
Do not allow dandischema 0.10.1 - new schema not yet supported by dandi-archive
…d by dandi-archive" This reverts commit ca4c170. dandi-archive supports new schema now, we should be fine to proceed.
Revert "Do not allow dandischema 0.10.1 - new schema not yet supporteed by dandi-archive"
dandi-archive requires this command to be run as part of system initialization in order to initialize the database to serve as a Django cache backend. it must be run in order for any endpoint with caching enabled to work properly.
…ests Add missing command to `dandi-archive` docker compose fixture
Xfail flaky ontobee tests, unless running daily tests
Convert DOI URLs in `related_publications` to related resources
Fix spelling of `--scheduled` option used in scheduled tests
Co-authored-by: Yaroslav Halchenko <debian@onerussian.com>
This environment var is needed for running the latest `dandiarchive/dandiarchive-api` image
Co-authored-by: Yaroslav Halchenko <debian@onerussian.com>
clarify resource identifier docs
Add DJANGO_DANDI_DEV_EMAIL env var to archive tests
This update is for meeting the requirement of having email for a contributor who is a contact person imposed by dandischema, dandi/dandi-schema#235
=== Do not change lines below ===
{
"chain": [],
"cmd": "sed -i -e 's/^\\( *\\)\\(\"name\": \"Tests, Dandi-Cli\",\\)/\\1\\2\\n\\1\"email\": \"nemo@example.com\",/g' dandi/cli/tests/data/update_dandiset_from_doi/biorxiv.json dandi/cli/tests/data/update_dandiset_from_doi/elife.json dandi/cli/tests/data/update_dandiset_from_doi/jneurosci.json dandi/cli/tests/data/update_dandiset_from_doi/nature.json dandi/cli/tests/data/update_dandiset_from_doi/neuron.json",
"exit": 0,
"extra_inputs": [],
"inputs": [],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
This reverts commit ccf4329.
Revert "Temporarily restrict dandischema requirement to `< 0.10.2`"
Broken on Python 3.8: python/mypy#17543
Do not use mypy 1.11.0
Assorted Docker Compose improvements
Add `--preserve-tree` option to `dandi download`
Further improvements to `docker-compose.yml`
Unbreak vcrpy install
This reverts commit b9c726d.
Revert "Unbreak vcrpy install"
aaronkanzer
changed the title
|
Cc @kabilar -- this should resolve the errors with abrupt stoppage to zarr uploads -- I'll let you know once this successfully gets deployed -- I forgot to add the appropriate labels 🤦 |
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