Repository navigation

All pull requests

Labels (9)Milestones (0)New pull request

fixed -G being ignored when given before --splice
#1365GriffRob1 opened Oct 13, 2026
Faster HiFi mapping with the same output
#1364armintoepfer opened Oct 9, 2026Contributor
build each macOS slice with its own SIMD flags
#1362darkavatar23 opened Aug 31, 2026
Add --mod-minimizer: experimental sketch-time mod-minimizer sampling
#1361lyfar opened Aug 25, 2026
Fix negative argument to memset
#1360guillaume-bugseq opened Aug 5, 2026
1
Avoid invalid RMQ iterator pointer state
#1358stanbot8 opened Aug 3, 2026
SIMDe build fixes
#1355blawrence-ont opened Jun 26, 2026Contributor
Fix python segfault when using an invalid Aligner
#1344blawrence-ont opened Feb 12, 2026Contributor
paftools sam2paf: Fix edge case for an empty trailing line in sam file
#1343cihga39871 opened Feb 9, 2026
typo
#1329frederic-mahe opened Oct 26, 2025
Add a usegalaxy.eu badge
#1326bgruening opened Oct 14, 2025
add jun_bed and uf parameter in mappy
#1291loganylchen opened Apr 1, 2025
Pymake
#1234cjw85 opened Aug 14, 2024Contributor
3
(python) Throw an exception if the index file can't be opened
#1195nickzoic opened Apr 19, 2024
Propogate LDFLAGS and other user-supplied options
#1168mr-c opened Feb 29, 2024
4
Fix ar call to support debugging symbols properly
#1167mr-c opened Feb 29, 2024
Autodetect aarch64 on POSIX platforms
#1106mp15 opened Aug 21, 2023
[TSan] |ktf_worker_t::i| is unsynchronised
#1056iiSeymour opened Apr 26, 2023Contributor
Enable compilation on aarch64 Linux
#924dslarm opened Jun 7, 2022
Dockerfile for minimal container
#804niemasd opened Aug 14, 2021
split-index mapping in separate processes
#787mlin opened Jul 21, 2021
4
Arm actions
#741hasindu2008 opened May 11, 2021Contributor
Check freads in index.c and bail if it fails
#572mp15 opened Mar 10, 2020