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Pull requests: lh3/minimap2

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Pull requests list

Add --mod-minimizer: experimental sketch-time mod-minimizer sampling
#1361 opened Aug 25, 2026 by lyfar Loading…
Fix negative argument to memset
#1360 opened Aug 5, 2026 by guillaume-bugseq Loading…
1
Avoid invalid RMQ iterator pointer state
#1358 opened Aug 3, 2026 by stanbot8 Loading…
SIMDe build fixes
#1355 opened Jun 26, 2026 by blawrence-ont Contributor Loading…
Fix python segfault when using an invalid Aligner
#1344 opened Feb 12, 2026 by blawrence-ont Contributor Loading…
paftools sam2paf: Fix edge case for an empty trailing line in sam file
#1343 opened Feb 9, 2026 by cihga39871 Loading…
typo
#1329 opened Oct 26, 2025 by frederic-mahe Loading…
Add a usegalaxy.eu badge
#1326 opened Oct 14, 2025 by bgruening Loading…
add jun_bed and uf parameter in mappy
#1291 opened Apr 1, 2025 by loganylchen Loading…
Pymake
#1234 opened Aug 14, 2024 by cjw85 Contributor Loading…
3
(python) Throw an exception if the index file can't be opened
#1195 opened Apr 19, 2024 by nickzoic Loading…
Propogate LDFLAGS and other user-supplied options
#1168 opened Feb 29, 2024 by mr-c Loading…
4
Fix ar call to support debugging symbols properly
#1167 opened Feb 29, 2024 by mr-c Loading…
Autodetect aarch64 on POSIX platforms
#1106 opened Aug 21, 2023 by mp15 Loading…
[TSan] |ktf_worker_t::i| is unsynchronised
#1056 opened Apr 26, 2023 by iiSeymour Contributor Loading…
Enable compilation on aarch64 Linux
#924 opened Jun 7, 2022 by dslarm Loading…
Dockerfile for minimal container
#804 opened Aug 14, 2021 by niemasd Loading…
split-index mapping in separate processes
#787 opened Jul 21, 2021 by mlin Loading…
4
Arm actions
#741 opened May 11, 2021 by hasindu2008 Contributor Loading…
Check freads in index.c and bail if it fails
#572 opened Mar 10, 2020 by mp15 • Draft
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