Build and run locally

docker build -t sincfold .

docker run -it --volume="./webdemo/:/sincfold:z" sincfold bash

Run

source python_env/bin/activate
cd sincfold
python
from main import main
structure_draw, dotbracket, fasta_file, ct_file, msg, html_file = main('srp_Bruc.abor._AE017223', 'AACCGGGUCAGGUCCGGAAGGAAGCAGCCCUAA')  

main('5s_Chlorobium-limicola-2', 'CCACGGCGACUAUAUCCCUGGUGUUCACCUCUUCCCAUUCCGAACAGAGUCGUUAAGCCCAGGAGAGCCGAUGGUACUGCUUUAUUGCGGGAGAGUAGGUCGUCGCCGAGU')

main('16s_C.elegans_domain2', 'GAUAAACCUUUAGCAAUAAACGAAAGUUUAACUAAGCCAUACUAACCCCAGGGUUGGUCAAUUUCGUGCCAGCCACCGCGGUCACACGAUUAACCCAAGCCAAUAGAAAUCGGCGUAAAGAGUGUUUUAGAUCAAUCCCCCAAUAAAGCUAAAAUUCACCUG')

Register

docker login
docker tag sincfold DOCKER_USERNAME/sincfold 
docker push DOCKER_USERNAME/sincfold