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1. multimedia multimedia Public

   multimedia is an R package for multimodal mediation analysis of microbiome data. It has been designed to help integration of relative abundance, survey, and metabolomic data through causal mediatio…

   R 1

2. lasy/alto lasy/alto Public

   'alto' is an R package that aligns topics from different LDA models, computes metrics for quantifying the goodness of alignment, and provides visualization functions to explore the alignment and ro…

   R 14 3

3. KaiyanM/MolPad KaiyanM/MolPad Public

   MolPad: An R-Shiny Package for Cluster Co-Expression Analysis in Longitudinal Microbiomics

   R 2 1

4. generative_review generative_review Public

   Code accompanying "Generative Models: An Interdisciplinary Perspective"

   HTML 7 2

5. glacier_mapping glacier_mapping Public

   Mapping glaciers in the Hindu Kush Himalaya, in partnership with ICIMOD.

   Python 31 18

6. interpretability_review interpretability_review Public

   Code accompanying a review article on interpretability and XAI. Includes examples for both simple (sparse regression) and sophisticated (concept bottlenecks) approaches, using notebooks that can be…

   Jupyter Notebook 3