These files were submitted to the ISBI Cell Tracking Challenge of 202…

…4. They were used to generate a submission to track 3, for generalizable submissions to the linking-only challenge. Results were also generated for the simulated datasets in track 4, using the same approach

Code submitted to the cell tracking challenge in September 2021. The …

…processing is the same as in the version submitted in June, but this version includes bat-files to reproduce the training of segmentation parameters for the primary track. This version of the code was submitted in the CSB-folder inside the SW-folder.

Code submitted to the cell tracking challenge in September 2021. The …

…processing is the same as in the version submitted in June, but this version includes bat-files to reproduce the training of segmentation parameters for the primary track.

The files submitted for the cell tracking challenge 2021. Results wer…

…e submitted for the primary track datasets and for the secondary track datasets Huh7 and TRIF. For the primary track datasets, I submitted all results except allGT-, allST-, and allGT+allST-results for BF-C2DL-HSC, BF-C2DL-MuSC, DIC-C2DH-HeLa and PhC-C2DH-U373, which were excluded when the allGT-, allST-, and allGT+allST-segmentations were trained.

This is the same as CTC2021_submission, except that I switched to seg…

…mentation only for the TRIF dataset. This is what I submitted in the SW\SCB folder.

The software uploaded to the ftp server. The processing includes trac…

…king. The .git folder and the .gitignore file was removed. This is an updated submission where the second C. elegans sequence has been shortened from 190 to 140 frames. This change was made between CTC 2019 and CTC 2020.

The software uploaded to the SW\CSB folder on the ftp server. Instead…

… of performing tracking, the software saves raw segmentations for the DRO, TRIC and TRIF datasets. The results will be used in the Cell Segmentation Benchmark (CSB). The .git folder and the .gitignore file were removed. This is an updated submission where the second C. elegans sequence has been shortened from 190 to 140 frames. This change was made between CTC 2019 and CTC 2020.

The software uploaded to the ftp server. The processing includes trac…

…king. The .git folder and the .gitignore file was removed.

The software uploaded to the SW\CSB folder on the ftp server. Instead…

… of performing tracking, the software saves raw segmentations for the DRO, TRIC and TRIF datasets. The results will be used in the Cell Segmentation Benchmark (CSB). The .git folder and the .gitignore file were removed.

This code fixes inconsistencies in the tracking results for the TRIC …

…datasets by only allowing one track in each node in the track linking. The code was submitted as an update to my software in the CTB.