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Commits on Sep 11, 2023

• added save to analysis_oputout

  alexandriai168

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• added saved merged_metadata

  alexandriai168

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• added test data

  alexandriai168

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• updating README to not have as much info

  alexandriai168

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  ae8a2ba

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• changes to config.sh to make cutadapt_reports in logs

  alexandriai168

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• changes for moving cutadapt reports to output folder logs

  alexandriai168

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Commits on Aug 23, 2023

• Update README.md

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  avancise

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Commits on Aug 21, 2023

• added example qual plot for documentation

  alexandriai168

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• Add files via upload

  alexandriai168

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• Delete flowchart.png

  alexandriai168

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• updated flowchart pic

  alexandriai168

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Commits on Aug 19, 2023

• added table of contents and diagram to README

  alexandriai168

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Commits on Aug 18, 2023

• Merge branch 'main' of https://github.com/MMARINeDNA/metabarcoding_QAQC_pipeline

  alexandriai168

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• added flowchart photo

  alexandriai168

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Commits on Aug 16, 2023

• Merge pull request MMARINeDNA#24 from alexandriai168/main

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  alexandriai168

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• Merge branch 'main' into main

  alexandriai168

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Commits on Aug 15, 2023

• added div for step4

  alexandriai168

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Commits on Aug 14, 2023

• Merge branch 'main' of https://github.com/MMARINeDNA/metabarcoding_QAQC_pipeline

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  alexandriai168

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• added explanation about samplesheet to readme

  alexandriai168

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• added need to use SampleSheetUsed.csv to readme

  alexandriai168

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• added picture of sample naming convention

  alexandriai168

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Commits on Aug 11, 2023

• Merge branch 'main' of https://github.com/MMARINeDNA/metabarcoding_QAQC_pipeline

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  alexandriai168

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• changes to report

  alexandriai168

  committed
  88a0b80

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• new dl db

  alexandriai168

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  2d76293

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• Update dl ref db

  alexandriai168

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• Update dada2QAQC.R

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  taniavaldiviac

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• Update dada2QAQC.R

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  taniavaldiviac

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• Update primer_data.csv

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  taniavaldiviac

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Commits on Aug 10, 2023

• added dependencies installer

  alexandriai168

  committed
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Commits on Aug 9, 2023

• got rid of annoying print statement

  alexandriai168

  committed
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• small bug in Rscript not RScript

  alexandriai168

  committed
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• eval false for specifc taxa for now

  alexandriai168

  committed
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• some rearranging to allow for several different markers for the qaurto files

  alexandriai168

  committed
  bf2c176

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• fixed up the issues with inputs for qmd yay

  alexandriai168

  committed
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Commits on Aug 8, 2023

• change grep to look for params:marker variable

  alexandriai168

  committed
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