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Alpha Carbon Backbone -> Docked Full Protein Script - #22

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jfreeze95 wants to merge 4 commits into
ketatam:mainfrom
jfreeze95:main
Open

Alpha Carbon Backbone -> Docked Full Protein Script #22
jfreeze95 wants to merge 4 commits into
ketatam:mainfrom
jfreeze95:main

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Issue:
The outputted files of DiffDock - PP contain alpha carbon traces (or backbones) with no other residue atoms. In order to use the output of DiffDock-PP for any further chemical purpose, the residue atoms must be added back in.
Previous handling:
None. Multiple issues opened and currently unaddressed since GitHub initial commit.
New handling:
Providing a script and documentation on usage to perform the transformation needed for the files output by DiffDock-PP.
Justification for new handling:
This is clearly a needed utility based on all the issues.
Keeping this separate from the other workflow pipeline in case users have desire for rigid C-alpha backbone without rest of residues.

Issue:
The outputted files of DiffDock - PP contain alpha carbon traces (or backbones) with no other residue atoms. In order to use the output of DiffDock-PP for any further chemical purpose, the residue atoms must be added back in.
Previous handling:
None. Multiple issues opened and currently unaddressed since GitHub initial commit.
New handling:
Providing a script and documentation on usage to perform the transformation needed for the files output by DiffDock-PP. 
Justification for new handling:
This is clearly a needed utility based on all the issues.
Keeping this separate from the other workflow pipeline in case users have desire for rigid C-alpha backbone without rest of residues.
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