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1. mutect mutect Public

   Forked from broadinstitute/mutect

   MuTect -- Accurate and sensitive cancer mutation detection

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2. picard picard Public

   Forked from broadinstitute/picard

   A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

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3. gatk gatk Public

   Forked from broadgsa/gatk

   GATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses

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4. git2pdf git2pdf Public

   Forked from pocketworks/git2pdf

   Print physical Kanban cards from your GitHub issues, and stick that sweet stuff on your office wall

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5. htsjdk htsjdk Public

   Forked from samtools/htsjdk

   A Java API for high-throughput sequencing data (HTS) formats.

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6. THetA THetA Public

   Forked from raphael-group/THetA

   Tumor Heterogeneity Analysis (THetA) is an algorithm that estimates the tumor purity and clonal/subclonal copy number aberrations directly from high-throughput DNA sequencing data. Please note that…

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