Update ProtExtract to version 1.0.1

Correct the output directory path to display a single slash instead of two at the end
Add 'v' prefix to the version number

Update ProtExtract to version 1.0.0

- Add option to set number of threads used by DIAMOND
- Add option to set output directory suffix
- Change default sensitivity for DIAMOND to 'default'
- Show number of extracted and verified proteins per proteome in terminal
- Renamed 'ProtExtract_files' to 'ProtExtract_scripts'
- Improve log file handling
- Improve gap detection
- Update README.md

Update ProtExtract to version 0.9.1

- Create a single temporary file for all best hits
- Include search options in default output directory name
- Verify necessary Python scripts before execution
- Execute Python scripts relative to the main script's location
- Slightly restructure code
- Update README.md for clarity on use case