Implement reduction for DIPOL instrument #73
Workflow file for this run
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| name: CI | |
| # by not building all branches on push, we avoid the duplicated builds in PRs | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - '**' | |
| pull_request: | |
| env: | |
| NUMBA_NUM_THREADS: 1 | |
| MPLBACKEND: Agg | |
| PYTEST_ADDOPTS: --color=yes | |
| jobs: | |
| static-code-checks: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10.9" | |
| tests: | |
| strategy: | |
| matrix: | |
| include: | |
| - python-version: "3.10.9" | |
| os: ubuntu-latest | |
| - python-version: "3.11" | |
| os: ubuntu-latest | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Update pip | |
| run: | | |
| python -m pip install --upgrade pip | |
| - name: Build the package | |
| run: | | |
| pip install build | |
| python -m build | |
| - name: Install the package | |
| run: pip install .[test] | |
| - name: Install the package in editable mode with all additional dependencies | |
| run: pip install --editable .[all] | |
| - name: Install httpdirfs to access astrometry index files without downloading them | |
| run: sudo apt install httpdirfs | |
| - name: Mount astrometry index file in default location | |
| run: mkdir -p $HOME/.astrometry_cache/5200 && httpdirfs --cache 'https://portal.nersc.gov/project/cosmo/temp/dstn/index-5200/LITE/' $HOME/.astrometry_cache/5200/ | |
| - name: Check that it was correctly mounted | |
| run: ls $HOME/.astrometry_cache/5200/index-5200-00.fits | |
| - name: Download test data | |
| env: | |
| TEST_DATA_PASSWORD: ${{ secrets.test_data_password }} | |
| run: wget --post-data "pass=$TEST_DATA_PASSWORD" 'https://vhega.iaa.es/iop4/iop4testdata.tar.gz' -O $HOME/iop4testdata.tar.gz | |
| - name: Force download of astrometry index files at this point (otherwise they are downloaded during the tests and astrocalibration might time out) | |
| run: python -c 'import iop4lib.config; iop4conf = iop4lib.Config(config_db=False); astrometry.series_5200.index_files(cache_directory=iop4conf.astrometry_cache_path, scales={0,1,2,3,4});' | |
| - name: Run tests (with -o log_cli=true -o log_cli_level=DEBUG to debug CI actions) | |
| run: pytest -o log_cli=true -o log_cli_level=DEBUG -vxs tests | |
| - name: Output some info for debugging | |
| run: | | |
| du -sh $HOME/.cache/httpdirfs/ | |
| docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10.9" | |
| - name: Update pip | |
| run: | | |
| python -m pip install --upgrade pip | |
| - name: Install doc dependencies | |
| run: | | |
| pip install -e .[doc] | |
| python -c 'import iop4lib; print(iop4lib.__version__)' | |
| - name: Build docs | |
| run: cd docs && make html |