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Natural Chromosome Layout

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@josiahseaman josiahseaman released this 13 Jan 16:17
· 4 commits to python-master since this release
2.5.3
cd0e3f7

Features added based on feedback from reviewers at Frontiers in Genetics:

  • Default Tile Layout places large chromosomes in one continuous vertical column. Tile Layout no longer has pages or rows of pages etc. as these were counter-intuitive and unbiological.
  • Ideogram and Parallel layouts also updated with new defaults
  • Directory and package renamed to FluentDNA
  • Updating to Python 3.7 and 3.8 support #93
  • New Mac release
  • Parallel layout Border boxes are on by default
  • --contigs argument allows you to set the order sequences will be displayed.
  • pip install FluentDNA from official PyPI registry
  • Visualizations output to /results/ instead of the confusing /www-data/dnadata/
  • #81 Packed layout: I found that less padding is better for keeping visual patterns coherent over clusters of columns.  The white space has a disproportionate effect if you space it out too much.
  • Migrated links to FluentDNA.com
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