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Commits on Jul 19, 2021

• Method comments for fluentdna.py and TileLayout.py

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Commits on Jan 25, 2021

• Decreased CSS margin to remove horizontal scroll bar

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Commits on Nov 10, 2020

• Version bump 2.5.4

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• FIX: Only use the first word of a FASTA scaffold name to match in alignment chain files separated by whitespace

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Commits on Jan 14, 2020

• Updating image links to new FluentDNA.com

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Commits on Jan 13, 2020

• Critical fix for Ideograms

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• Switched starting directory in the case where FluentDNA is pip installed

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• Eliminates "Page" concept from default ParallelLayout, in keeping with new TileLayout defaults. Fix for title not showing up in ParallelLayout.

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Commits on Jan 8, 2020

• Moving html_template and example_data out of the parent directory. Unifying PyInstaller spec between Mac and Windows paths.

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Commits on Jan 7, 2020

• Robust check for html_template

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• Robust check for html_template

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• Switch of "smart chromosome layout" when using a custom layout.

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• Adding an extra mega-row of padding for titles in the middle of chromosome columns.

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• Outputting total processing time of all jobs for benchmarking.

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Commits on Jan 6, 2020

• Changed default Tile Layout to look like chromosomes laid side by side. Automatically scanning FASTA contents for optimum size. Removed fat_headers concept from code.

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• Updating installation information for Python 3.7 and 3.8

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Commits on Nov 25, 2019

• Bump Utils version to 1.0.13 to solve #93

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Commits on Nov 24, 2019

• Possible Fix #93 os import of errno

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Commits on Oct 30, 2019

• Updated setup.py for PyPI

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• Merge pull request #91 from josiahseaman/fluentdna_rename

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• #90 Updating test suite documentation

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Commits on Oct 29, 2019

• Closes #90 Renamed FluentDNAUtils.py

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Commits on Oct 28, 2019

• #90 renamed directory

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• #90 Renamed all File contents from DDV to FluentDNA

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• Merge pull request #87 from josiahseaman/i86_repeatmasker_gallery

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• #65 Refined border box text.

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• Try to determine if this is running in a terminal

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• revert pip version

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• Adding pip version requirements

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• Clarifying install. Removed DDV/ in setup.py

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• DDV/html_template/

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Commits on Oct 26, 2019

• Version bump: 2.4.5: Added --no_server argument for batch jobs. Improved error handling.

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Commits on Oct 25, 2019

• Parallel layout Border boxes are on by default

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• --contigs argument allows you to set the order sequences will be displayed.

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• #86 Sorting repeats by length, copying sources directory in batch.

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