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Kmer-based classification of Apicomplexan 18S rRNA genes

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Parasight: k-mer-based classification of Apicomplexan 18S rRNA genes

by Jason Moggridge with contributors Nick Werry, Kerry Woolnough and Julia Harvie

The main script - that builds all the classifiers, tests them, and creates all the figures in the submission - is the file 'JMoggridge_Apicomplexa_classifier_notebook.Rmd' (the .pdf version of the same name is a rendered version of the script, output, and written sections of the submission)

The submitted paper is the file 'JMoggridge_parasight_pdf.pdf', which is rendered from the file 'JMoggridge_parasight_pdf.Rmd'.

The original dataset downloaded from NCBI is available upon request

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Kmer-based classification of Apicomplexan 18S rRNA genes

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