Fiji Build (MiniMaven): make sure to exclude clojure from building

Clojure requires antrun to build, which we do not support in MiniMaven.

While at it, make sure that the current pom is not re-parsed.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>

Fakefile

@@ -103,7 +103,6 @@ SUBMODULE_TARGETS=\
 	jars/VectorString.jar \
 	plugins/TrakEM2_.jar \
 	plugins/mpicbg_.jar \
-	jars/clojure.jar \
 	plugins/ij-ImageIO_.jar \
 	jars/jacl.jar \
 	jars/batik.jar \
@@ -302,7 +301,6 @@ CLASSPATH(jars/imglib2-scripting.jar)=jars/ij.jar:jars/imglib2.jar:jars/imglib2-
 jars/imglib2-scripting.jar <- modules/imglib/
 CLASSPATH(jars/imglib2-ops.jar)=jars/imglib2.jar
 jars/imglib2-ops.jar <- modules/imglib/
-jars/clojure.jar <- modules/clojure/
 plugins/loci_tools.jar <- modules/bio-formats/
 CLASSPATH(plugins/loci_tools.jar)=jars/imglib2.jar
 CLASSPATH(jars/VectorString.jar)=jars/ij.jar:jars/Jama.jar:$JAVA3D_JARS
@@ -529,7 +527,6 @@ precompile-submodules[] <- \
 	precompiled/TrakEM2_.jar \
 	precompiled/mpicbg_.jar \
 	precompiled/mpicbg.jar \
-	precompiled/clojure.jar \
 	precompiled/ij-ImageIO_.jar \
 	precompiled/jacl.jar \
 	precompiled/batik.jar \
@@ -545,7 +542,6 @@ precompile-submodules[] <- \
 	precompiled/jsch.jar \
 
 precompiled/ij.jar <- jars/ij.jar
-precompiled/clojure.jar <- jars/clojure.jar
 precompiled/jacl.jar <- jars/jacl.jar
 precompiled/batik.jar <- jars/batik.jar
 precompiled/junit.jar <- jars/junit.jar

src-plugins/fake/src/main/java/fiji/build/SubFake.java

@@ -124,15 +124,17 @@ public POM getPOM() {
 			String ijDir = System.getProperty("ij.dir");
 			File submodules = new File(ijDir, "modules");
 			File srcPlugins = new File(ijDir, "src-plugins");
-			if (submodules.exists())
+			miniMaven.excludeFromMultiProjects(file.getParentFile());
+			if (submodules.exists()) {
+				miniMaven.excludeFromMultiProjects(new File(submodules, "clojure"));
 				miniMaven.addMultiProjectRoot(submodules);
+			}
 			if (srcPlugins.exists()) {
 				miniMaven.addMultiProjectRoot(srcPlugins);
 				File pom = new File(srcPlugins, "pom.xml");
 				if (pom.exists())
 					miniMaven.parse(pom);
 			}
-			miniMaven.excludeFromMultiProjects(file.getParentFile());
 			pom = miniMaven.parse(file);
 			if (!targetBasename.equals(pom.getArtifact()))
 				pom = pom.findPOM(new Coordinate(null, targetBasename, null), miniMaven.verbose, miniMaven.downloadAutomatically);