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Commits on Jul 7, 2020

• Ensuring (int) overflow doesn't mess up allocation of, or indexing into,

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  JamesBarbetti

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  e50f1c1

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Commits on May 6, 2019

• Relax ASSERT for rooted branch lengths.

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  bqminh

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  7751bf4

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Commits on May 4, 2019

• assign joint empirical state_freq as for single model

  bqminh

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  0e9e313

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• Properly optimising linked +FO model

  bqminh

  committed
  694936a

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Commits on May 2, 2019

• Bug fix: Reimplement --link-model and --model-joint to be memory thread safe

  bqminh

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  eb2da1d

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Commits on Apr 18, 2019

• Comment out PartitionModelPlen::getNDim that distort --model-joint option

  bqminh

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  4850591

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Commits on Apr 14, 2019

• Towards fixing -spp with --model-joint

  bqminh

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  a4c91b0

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Commits on Apr 12, 2019

• Fix problem GTR20+FO optimisation.

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  bqminh

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  38ad8ce

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• Fix --model-joint with -spp (edge-linked partition model)

  bqminh

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  36bd872

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Commits on Dec 20, 2017

• Support edge-linked ModelFinder. Fix crash with -m ...MERGE...

  bqminh

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  1f9202b

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Commits on Jun 23, 2017

• change version 1.6.beta5. Refactor checkpoint file for model and rate to facilitate model testing.

  bqminh

  committed
  6e15a2e

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Commits on Jun 9, 2017

• do not stop when too high partition rates

  bqminh

  committed
  07498ff

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Commits on May 6, 2017

• create utils folder

  bqminh

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  53c3085

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• refactor assert to ASSERT

  bqminh

  committed
  acf2016

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Commits on May 4, 2017

• separating phylosupertreeplen.h into different files

  OlgaChern

  committed
  66bf6a9

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