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Unscented Kalman Filter (UKF)

Examples

inst/model_voxels_2param.R example script for applying UKF to a pair of voxel time series in data/voxel_A&B_data.txt and optimizing coupling parameters for an ode model of synchronization. todo: bind data to the library as rda?

inst/test_simulate.R example script to simulate pair of voxel data. todo: fix runge-kutta.

Abstract

Websites

Related References

To install:

>library(devtools)
>install_github("insilico/UKF")  
>library(UFK)

Dependencies

Used for some pre-process smoothing of time series, but not required for UKF.

install.packages(c('KernSmooth'))

Contact

brett.mckinney@gmail.com

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