Make prune not modify arg

.github/workflows/ruby.yml

@@ -11,7 +11,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        ruby-version: ['2.6', '2.7']
+        ruby-version: ['2.7', '3.2']
 
     steps:
     - uses: actions/checkout@v2
@@ -23,4 +23,4 @@ jobs:
     - name: Run tests
       run: bundle exec rake
     - name: Rubocop
-      run: bundle exec rubocop
+      run: bundle exec rubocop

.rubocop_todo.yml

@@ -1,13 +1,21 @@
 # This configuration was generated by
 # `rubocop --auto-gen-config`
-# on 2021-03-30 17:30:14 -0400 using RuboCop version 0.80.0.
+# on 2023-03-13 17:58:33 UTC using RuboCop version 1.48.1.
 # The point is for the user to remove these configuration records
 # one by one as the offenses are removed from the code base.
 # Note that changes in the inspected code, or installation of new
 # versions of RuboCop, may require this file to be generated again.
 
+# Offense count: 1
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: EnforcedStyleAlignWith, Severity.
+# SupportedStylesAlignWith: start_of_line, begin
+Layout/BeginEndAlignment:
+  Exclude:
+    - 'lib/fhir_stu3_models/bootstrap/model.rb'
+
 # Offense count: 49
-# Cop supports --auto-correct.
+# This cop supports safe autocorrection (--autocorrect).
 Layout/EmptyLineAfterGuardClause:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/definitions.rb'
@@ -23,31 +31,39 @@ Layout/EmptyLineAfterGuardClause:
     - 'lib/fhir_stu3_models/fluentpath/parse.rb'
 
 # Offense count: 1
-# Cop supports --auto-correct.
+# This cop supports safe autocorrection (--autocorrect).
 Layout/RescueEnsureAlignment:
+  Exclude:
+    - 'lib/fhir_stu3_models/bootstrap/model.rb'
+
+# Offense count: 1
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: AllowForAlignment.
+Layout/SpaceBeforeFirstArg:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/hashable.rb'
 
 # Offense count: 6
-# Cop supports --auto-correct.
+# This cop supports unsafe autocorrection (--autocorrect-all).
 Lint/NonDeterministicRequireOrder:
   Exclude:
     - 'lib/fhir_stu3_models.rb'
 
 # Offense count: 2
-# Cop supports --auto-correct.
+# This cop supports safe autocorrection (--autocorrect).
 Lint/ToJSON:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/json.rb'
     - 'lib/fhir_stu3_models/fhir_ext/structure_definition_finding.rb'
 
-# Offense count: 38
+# Offense count: 39
+# Configuration parameters: AllowedMethods, AllowedPatterns, CountRepeatedAttributes.
 Metrics/AbcSize:
-  Max: 405
+  Max: 407
 
 # Offense count: 7
-# Configuration parameters: CountComments, ExcludedMethods.
-# ExcludedMethods: refine
+# Configuration parameters: CountComments, CountAsOne, AllowedMethods, AllowedPatterns.
+# AllowedMethods: refine
 Metrics/BlockLength:
   Max: 70
 
@@ -57,65 +73,103 @@ Metrics/BlockNesting:
   Max: 5
 
 # Offense count: 6
-# Configuration parameters: CountComments.
+# Configuration parameters: CountComments, CountAsOne.
 Metrics/ClassLength:
-  Max: 345
+  Max: 343
 
-# Offense count: 25
+# Offense count: 33
+# Configuration parameters: AllowedMethods, AllowedPatterns.
 Metrics/CyclomaticComplexity:
-  Max: 69
+  Max: 77
 
-# Offense count: 43
-# Configuration parameters: CountComments, ExcludedMethods.
+# Offense count: 45
+# Configuration parameters: CountComments, CountAsOne, AllowedMethods, AllowedPatterns.
 Metrics/MethodLength:
-  Max: 127
+  Max: 125
 
-# Offense count: 1
-# Configuration parameters: CountComments.
+# Offense count: 2
+# Configuration parameters: CountComments, CountAsOne.
 Metrics/ModuleLength:
   Max: 114
 
-# Offense count: 24
+# Offense count: 30
+# Configuration parameters: AllowedMethods, AllowedPatterns.
 Metrics/PerceivedComplexity:
-  Max: 72
+  Max: 80
+
+# Offense count: 5
+# Configuration parameters: EnforcedStyle, AllowedPatterns.
+# SupportedStyles: snake_case, camelCase
+Naming/MethodName:
+  Exclude:
+    - 'lib/fhir_stu3_models/fhir_ext/structure_definition_finding.rb'
 
 # Offense count: 4
 # Configuration parameters: MinNameLength, AllowNamesEndingInNumbers, AllowedNames, ForbiddenNames.
-# AllowedNames: io, id, to, by, on, in, at, ip, db, os, pp
+# AllowedNames: as, at, by, cc, db, id, if, in, io, ip, of, on, os, pp, to
 Naming/MethodParameterName:
   Exclude:
     - 'lib/fhir_stu3_models/fhir_ext/structure_definition_compare.rb'
 
 # Offense count: 2
-# Cop supports --auto-correct.
+# This cop supports safe autocorrection (--autocorrect).
 # Configuration parameters: PreferredName.
 Naming/RescuedExceptionsVariableName:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/hashable.rb'
 
+# Offense count: 33
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: EnforcedStyle.
+# SupportedStyles: separated, grouped
+Style/AccessorGrouping:
+  Exclude:
+    - 'lib/fhir_stu3_models/bootstrap/field.rb'
+    - 'lib/fhir_stu3_models/bootstrap/generator.rb'
+    - 'lib/fhir_stu3_models/bootstrap/template.rb'
+    - 'lib/fhir_stu3_models/fhir_ext/element_definition.rb'
+    - 'lib/fhir_stu3_models/fhir_ext/structure_definition.rb'
+    - 'lib/fhir_stu3_models/fhir_ext/structure_definition_finding.rb'
+
 # Offense count: 1
-# Configuration parameters: .
-# SupportedStyles: inline, group
-Style/AccessModifierDeclarations:
-  EnforcedStyle: inline
+# This cop supports unsafe autocorrection (--autocorrect-all).
+# Configuration parameters: EnforcedStyle.
+# SupportedStyles: nested, compact
+Style/ClassAndModuleChildren:
+  Exclude:
+    - '.simplecov'
 
 # Offense count: 17
 Style/ClassVars:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/definitions.rb'
     - 'lib/fhir_stu3_models/fluentpath/parse.rb'
 
+# Offense count: 1
+Style/CombinableLoops:
+  Exclude:
+    - 'lib/fhir_stu3_models/fhir_ext/structure_definition_compare.rb'
+
+# Offense count: 1
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: Keywords, RequireColon.
+# Keywords: TODO, FIXME, OPTIMIZE, HACK, REVIEW, NOTE
+Style/CommentAnnotation:
+  Exclude:
+    - 'Guardfile'
+
 # Offense count: 6
+# This cop supports unsafe autocorrection (--autocorrect-all).
 Style/CommentedKeyword:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/hashable.rb'
     - 'lib/fhir_stu3_models/bootstrap/model.rb'
 
-# Offense count: 14
+# Offense count: 15
+# Configuration parameters: AllowedConstants.
 Style/Documentation:
   Exclude:
-    - 'spec/**/*'
-    - 'test/**/*'
+    - '.simplecov'
     - 'lib/fhir_stu3_models/bootstrap/definitions.rb'
     - 'lib/fhir_stu3_models/bootstrap/field.rb'
     - 'lib/fhir_stu3_models/bootstrap/generator.rb'
@@ -131,51 +185,72 @@ Style/Documentation:
     - 'lib/fhir_stu3_models/fluentpath/expression.rb'
     - 'lib/fhir_stu3_models/fluentpath/parse.rb'
 
-# Offense count: 22
-# Cop supports --auto-correct.
-# Configuration parameters: EnforcedStyle.
-# SupportedStyles: always, always_true, never
-Style/FrozenStringLiteralComment:
-  Enabled: false
+# Offense count: 1
+# This cop supports unsafe autocorrection (--autocorrect-all).
+Style/GlobalStdStream:
+  Exclude:
+    - 'lib/fhir_stu3_models/fhir.rb'
 
-# Offense count: 29
-# Cop supports --auto-correct.
+# Offense count: 28
+# This cop supports safe autocorrection (--autocorrect).
 Style/IfUnlessModifier:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/generator.rb'
-    - 'lib/fhir_stu3_models/bootstrap/hashable.rb'
     - 'lib/fhir_stu3_models/bootstrap/model.rb'
     - 'lib/fhir_stu3_models/bootstrap/template.rb'
     - 'lib/fhir_stu3_models/bootstrap/xml.rb'
     - 'lib/fhir_stu3_models/fhir_ext/structure_definition.rb'
     - 'lib/fhir_stu3_models/fhir_ext/structure_definition_compare.rb'
 
-# Offense count: 1
-Style/MethodMissingSuper:
-  Exclude:
-    - 'lib/fhir_stu3_models/bootstrap/model.rb'
-
 # Offense count: 1
 Style/MissingRespondToMissing:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/model.rb'
 
-# Offense count: 9
+# Offense count: 6
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: AllowMethodComparison.
 Style/MultipleComparison:
   Exclude:
-    - 'lib/fhir_stu3_models/bootstrap/definitions.rb'
     - 'lib/fhir_stu3_models/bootstrap/generator.rb'
     - 'lib/fhir_stu3_models/bootstrap/model.rb'
     - 'lib/fhir_stu3_models/fhir_ext/structure_definition.rb'
 
+# Offense count: 2
+# Configuration parameters: AllowedMethods.
+# AllowedMethods: respond_to_missing?
+Style/OptionalBooleanParameter:
+  Exclude:
+    - 'lib/fhir_stu3_models/bootstrap/generator.rb'
+    - 'lib/fhir_stu3_models/bootstrap/template.rb'
+
 # Offense count: 1
-# Cop supports --auto-correct.
+# This cop supports safe autocorrection (--autocorrect).
 Style/OrAssignment:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/generator.rb'
 
+# Offense count: 3
+# This cop supports safe autocorrection (--autocorrect).
+Style/RedundantRegexpCharacterClass:
+  Exclude:
+    - 'lib/fhir_stu3_models/fhir.rb'
+
+# Offense count: 3
+# This cop supports safe autocorrection (--autocorrect).
+Style/RedundantRegexpEscape:
+  Exclude:
+    - 'lib/fhir_stu3_models/fhir.rb'
+    - 'lib/fhir_stu3_models/fluentpath/parse.rb'
+
+# Offense count: 1
+# This cop supports unsafe autocorrection (--autocorrect-all).
+Style/RedundantSelfAssignment:
+  Exclude:
+    - 'lib/fhir_stu3_models/fhir_ext/element_definition.rb'
+
 # Offense count: 16
-# Cop supports --auto-correct.
+# This cop supports safe autocorrection (--autocorrect).
 # Configuration parameters: EnforcedStyle.
 # SupportedStyles: implicit, explicit
 Style/RescueStandardError:
@@ -192,19 +267,53 @@ Style/RescueStandardError:
     - 'lib/fhir_stu3_models/fluentpath/parse.rb'
 
 # Offense count: 4
-# Cop supports --auto-correct.
-# Configuration parameters: ConvertCodeThatCanStartToReturnNil, AllowedMethods.
+# This cop supports unsafe autocorrection (--autocorrect-all).
+# Configuration parameters: ConvertCodeThatCanStartToReturnNil, AllowedMethods, MaxChainLength.
 # AllowedMethods: present?, blank?, presence, try, try!
 Style/SafeNavigation:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/xml.rb'
     - 'lib/fhir_stu3_models/fhir_ext/structure_definition.rb'
 
+# Offense count: 9
+# This cop supports unsafe autocorrection (--autocorrect-all).
+Style/SlicingWithRange:
+  Exclude:
+    - 'lib/fhir_stu3_models/bootstrap/field.rb'
+    - 'lib/fhir_stu3_models/bootstrap/generator.rb'
+    - 'lib/fhir_stu3_models/bootstrap/model.rb'
+    - 'lib/fhir_stu3_models/fhir_ext/structure_definition.rb'
+    - 'lib/fhir_stu3_models/fluentpath/parse.rb'
+
+# Offense count: 1
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: AllowModifier.
+Style/SoleNestedConditional:
+  Exclude:
+    - 'lib/fhir_stu3_models/fhir_ext/structure_definition_compare.rb'
+
+# Offense count: 5
+# This cop supports safe autocorrection (--autocorrect).
+# Configuration parameters: EnforcedStyle, ConsistentQuotesInMultiline.
+# SupportedStyles: single_quotes, double_quotes
+Style/StringLiterals:
+  Exclude:
+    - '.simplecov'
+
 # Offense count: 7
-# Cop supports --auto-correct.
+# This cop supports unsafe autocorrection (--autocorrect-all).
 # Configuration parameters: EnforcedStyle.
 # SupportedStyles: forbid_for_all_comparison_operators, forbid_for_equality_operators_only, require_for_all_comparison_operators, require_for_equality_operators_only
 Style/YodaCondition:
   Exclude:
     - 'lib/fhir_stu3_models/bootstrap/preprocess.rb'
     - 'lib/fhir_stu3_models/fluentpath/parse.rb'
+
+# Offense count: 8
+# This cop supports unsafe autocorrection (--autocorrect-all).
+Style/ZeroLengthPredicate:
+  Exclude:
+    - 'lib/fhir_stu3_models/fhir.rb'
+    - 'lib/fhir_stu3_models/fhir_ext/structure_definition.rb'
+    - 'lib/fhir_stu3_models/fhir_ext/structure_definition_compare.rb'
+    - 'lib/fhir_stu3_models/fluentpath/parse.rb'