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The data category ihm_ordered_ensemble is a bit misleading and inaccurate for two reasons:
It is not actually an ensemble, but just a directed graph of model groups, none of which need be ensembles themselves.
The directed graph need not actually define a strict ordering - it can define a cycle or a tree (i.e. branched process).
A suggested fix would be to re-name the category ihm_partially_ordered_model_groups. That seems descriptive enough, and should cover all cases which the current dictionary can be used to represent. The term "partially ordered" comes from the concept of partially ordered sets in mathematics: https://en.wikipedia.org/wiki/Partially_ordered_set
It may also be useful to add an optional descriptive category data item to explicitly identify if the model groups represent a strict ordering, a cycle or a branched process. This is of course implicit in the edges, but not obvious without tracing out the whole graph.
The text was updated successfully, but these errors were encountered:
The data category
ihm_ordered_ensemble
is a bit misleading and inaccurate for two reasons:A suggested fix would be to re-name the category
ihm_partially_ordered_model_groups
. That seems descriptive enough, and should cover all cases which the current dictionary can be used to represent. The term "partially ordered" comes from the concept of partially ordered sets in mathematics: https://en.wikipedia.org/wiki/Partially_ordered_setIt may also be useful to add an optional descriptive category data item to explicitly identify if the model groups represent a strict ordering, a cycle or a branched process. This is of course implicit in the edges, but not obvious without tracing out the whole graph.
The text was updated successfully, but these errors were encountered: