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Hocky Research Group

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  1. pyColloidomer_2023 pyColloidomer_2023 Public

    Forked from gauravmitra1995/pyColloidomer_2023

    This repository contains the python framework for performing MD simulations to study self-assembly of droplets with mobile binders. A crucial element of our model is dynamic binding and unbinding w…

    Python 2 2

  2. PenaUnbindingPaper PenaUnbindingPaper Public

    Forked from wpena1/manuscript_1

    Jupyter Notebook 1 2

  3. quench_paper_2023 quench_paper_2023 Public

    Jupyter Notebook 1 1

  4. weighted-SGMM-paper weighted-SGMM-paper Public

    Forked from SasmalSubarna/wSGMM

    Jupyter Notebook 1

  5. hocky-research-group.github.io hocky-research-group.github.io Public

    HTML

  6. plumed2 plumed2 Public

    Forked from plumed/plumed2

    Development version of plumed 2

    C++

Repositories

Showing 10 of 19 repositories
  • hocky-research-group.github.io Public
    hocky-research-group/hocky-research-group.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Apr 23, 2025
  • Zang-NonClassical-2025 Public
    hocky-research-group/Zang-NonClassical-2025’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 15, 2025
  • Pena-Vinculin-Unbinding Public Forked from wpena1/factin_vinculin

    Computational assessment of factin-vinculin unbinding kinetics

    hocky-research-group/Pena-Vinculin-Unbinding’s past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated Apr 3, 2025
  • Sasmal_posLDA_iteration Public Forked from SasmalSubarna/posLDA_iteration

    Repository for iterative linear discriminate analysis on positions paper

    hocky-research-group/Sasmal_posLDA_iteration’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Mar 20, 2025
  • Fitzmaurice-OuterMembrane-2025 Public

    Simulation files for 2025 BPJ paper

    hocky-research-group/Fitzmaurice-OuterMembrane-2025’s past year of commit activity
    Shell 0 0 0 0 Updated Feb 6, 2025
  • weighted-SGMM-paper Public Forked from SasmalSubarna/wSGMM
    hocky-research-group/weighted-SGMM-paper’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Dec 2, 2024
  • quench_paper_2023 Public
    hocky-research-group/quench_paper_2023’s past year of commit activity
    Jupyter Notebook 1 1 0 1 Updated Aug 9, 2024
  • pyColloidomer_2023 Public Forked from gauravmitra1995/pyColloidomer_2023

    This repository contains the python framework for performing MD simulations to study self-assembly of droplets with mobile binders. A crucial element of our model is dynamic binding and unbinding where kinetics are tunable, and can depend on external factors such as temperature, implemented as an open-source custom plugin to HOOMD-Blue.

    hocky-research-group/pyColloidomer_2023’s past year of commit activity
    Python 2 3 0 0 Updated Aug 9, 2024
  • posLDA_paper_2023 Public Forked from SasmalSubarna/posLDA_paper_2023

    Repository for position LDA paper

    hocky-research-group/posLDA_paper_2023’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Aug 9, 2024
  • FISST-RX_2023 Public Forked from yuvrajsingh24/FisstFollowup2023

    Data for FISST+RX manuscript (2023)

    hocky-research-group/FISST-RX_2023’s past year of commit activity
    Shell 0 1 0 0 Updated Aug 9, 2024
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