Skip to content

Commit

Permalink
lmbda idx build
Browse files Browse the repository at this point in the history
  • Loading branch information
Falk Hildebrand (QIB) committed Jan 16, 2024
1 parent afa285b commit 3ad7f58
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion lotus2
Original file line number Diff line number Diff line change
Expand Up @@ -5249,7 +5249,7 @@ sub doDBblasting($ $ $) {
printL "Rewriting taxonomy DB to Lambda3 > 3.0 version\n", 0;
systemL "rm -rf $DB.*;";
}
if ( !-f "$DB.lba" && !-f "$DB.lba.gz" ) {
if ( !-f "$DB.lba.gz" || -s "$DB.lba.gz" < 100 ) {
printL "\n\nBuilding LAMBDA index anew for $DB (this only happens the first time you use this ref DB, it may take several hours to build)..\n\n",0;

#die($DB.".dna5.fm.sa.val");
Expand Down

0 comments on commit 3ad7f58

Please sign in to comment.