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I am very new to 3D models so please excuse me if my question does not make sense. I was wondering if it is possible to have a maping between a pbd file and the HiC contact map matrix.
The reason for asking this is that I plan to annotate genes on a HiC contact map matrix. Then, once I had the corresponding pdb file as generated by pastis I would like to annotate the genes on the 3D model (my own visualization script).