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halexand · Nov 8, 2015 · 4ba7507 · 4ba7507
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diff --git a/Figures/v1/Comparison_McKewGenes_labeled.pdf b/Figures/v1/Comparison_McKewGenes_labeled.pdf
diff --git a/Figures/v1/Figure1.pdf b/Figures/v1/Figure1.pdf
diff --git a/Figures/v1/Figure1_nutrients.pdf b/Figures/v1/Figure1_nutrients.pdf
diff --git a/Figures/v1/Figure3_example.pdf b/Figures/v1/Figure3_example.pdf
diff --git a/...owtie2/.ipynb_checkpoints/Ehux_SigGenes-isoformOrhtologusGroupComparison-checkpoint.ipynb b/...owtie2/.ipynb_checkpoints/Ehux_SigGenes-isoformOrhtologusGroupComparison-checkpoint.ipynb
diff --git a/output_RSEM_Bowtie2/.ipynb_checkpoints/Practice PCA-checkpoint.ipynb b/output_RSEM_Bowtie2/.ipynb_checkpoints/Practice PCA-checkpoint.ipynb
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diff --git a/output_RSEM_Bowtie2/Comparison_McKewGenes.pdf b/output_RSEM_Bowtie2/Comparison_McKewGenes.pdf
diff --git a/output_RSEM_Bowtie2/Comparison_McKewGenes_labeled.pdf b/output_RSEM_Bowtie2/Comparison_McKewGenes_labeled.pdf
diff --git a/output_RSEM_Bowtie2/Ehux_SigGenes-isoformOrhtologusGroupComparison.ipynb b/output_RSEM_Bowtie2/Ehux_SigGenes-isoformOrhtologusGroupComparison.ipynb
diff --git a/output_RSEM_Bowtie2/McKewGenesTargets/outBlast.out b/output_RSEM_Bowtie2/McKewGenesTargets/outBlast.out
diff --git a/output_RSEM_Bowtie2/McKewGenesTargets/outGenes.fa b/output_RSEM_Bowtie2/McKewGenesTargets/outGenes.fa
diff --git a/output_RSEM_Bowtie2/McKewGenesTargets/tmp b/output_RSEM_Bowtie2/McKewGenesTargets/tmp
diff --git a/output_RSEM_Bowtie2/Nutrient_Gene_FC_Table.txt b/output_RSEM_Bowtie2/Nutrient_Gene_FC_Table.txt
diff --git a/output_RSEM_Bowtie2/Nutrient_Gene_FC_Table.xlsx b/output_RSEM_Bowtie2/Nutrient_Gene_FC_Table.xlsx
diff --git a/output_RSEM_Bowtie2/Practice PCA.ipynb b/output_RSEM_Bowtie2/Practice PCA.ipynb
diff --git a/output_RSEM_Bowtie2/Q_con_vs_R_PlusN_TMM_scatter.pdf b/output_RSEM_Bowtie2/Q_con_vs_R_PlusN_TMM_scatter.pdf
diff --git a/output_RSEM_Bowtie2/Q_con_vs_S_PlusP_TMM_scatter.pdf b/output_RSEM_Bowtie2/Q_con_vs_S_PlusP_TMM_scatter.pdf
diff --git a/output_RSEM_Bowtie2/Q_con_vs_T_MinusN_TMM_scatter.pdf b/output_RSEM_Bowtie2/Q_con_vs_T_MinusN_TMM_scatter.pdf
diff --git a/output_RSEM_Bowtie2/Q_con_vs_V_MinusP_TMM_scatter.pdf b/output_RSEM_Bowtie2/Q_con_vs_V_MinusP_TMM_scatter.pdf
diff --git a/output_RSEM_Bowtie2/Q_con_vs_X_PlusDSW_TMM_scatter.pdf b/output_RSEM_Bowtie2/Q_con_vs_X_PlusDSW_TMM_scatter.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Calcification.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Calcification.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Carbon.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Carbon.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Haploid.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Haploid.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Nitrogen.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Nitrogen.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Phosphorus.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_R_PlusN.Phosphorus.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Calcification.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Calcification.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Carbon.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Carbon.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Haploid.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Haploid.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Nitrogen.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Nitrogen.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Phosphorus.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_S_PlusP.Phosphorus.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_T_MinusN.Calcification.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_T_MinusN.Calcification.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_T_MinusN.Carbon.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_T_MinusN.Carbon.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_T_MinusN.Nitrogen.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_T_MinusN.Nitrogen.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_T_MinusN.Phosphorus.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_T_MinusN.Phosphorus.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Calcification.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Calcification.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Carbon.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Carbon.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Haploid.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Haploid.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Nitrogen.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Nitrogen.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Phosphorus.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_V_MinusP.Phosphorus.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Calcification.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Calcification.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Carbon.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Carbon.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Haploid.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Haploid.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Nitrogen.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Nitrogen.pdf
diff --git a/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Phosphorus.pdf b/output_RSEM_Bowtie2/ScatterOG.Q_con_vs_X_PlusDSW.Phosphorus.pdf
diff --git a/output_RSEM_Bowtie2/test.pdf b/output_RSEM_Bowtie2/test.pdf
diff --git a/output_RSEM_Bowtie2/~$Nutrient_Gene_FC_Table.xlsx b/output_RSEM_Bowtie2/~$Nutrient_Gene_FC_Table.xlsx