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Update ahn.py
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rubencalje committed Sep 18, 2024
1 parent 329d9c2 commit f7484e7
Showing 1 changed file with 239 additions and 27 deletions.
266 changes: 239 additions & 27 deletions nlmod/read/ahn.py
Original file line number Diff line number Diff line change
@@ -1,12 +1,15 @@
import datetime as dt
import logging
import requests

import geopandas as gpd
import matplotlib.pyplot as plt
import numpy as np
import pandas as pd
import shapely
import rasterio
import rioxarray
from rioxarray.merge import merge_arrays
import xarray as xr
from rasterio import merge
from rasterio.io import MemoryFile
Expand All @@ -15,14 +18,14 @@
from .. import cache
from ..dims.grid import get_extent
from ..dims.resample import structured_da_to_ds
from ..util import get_ds_empty
from ..util import get_ds_empty, extent_to_polygon
from .webservices import arcrest, wcs

logger = logging.getLogger(__name__)


@cache.cache_netcdf(coords_2d=True)
def get_ahn(ds=None, identifier="AHN4_DTM_5m", method="average", extent=None):
def get_ahn(ds=None, identifier="AHN4_5M_M", method="average", extent=None):
"""Get a model dataset with ahn variable.
Parameters
Expand All @@ -31,11 +34,12 @@ def get_ahn(ds=None, identifier="AHN4_DTM_5m", method="average", extent=None):
dataset with the model information.
identifier : str, optional
Possible values for the different AHN-versions are (casing is important):
AHN1: 'ahn1_5m'
AHN2: 'ahn2_05m_i', 'ahn2_05m_n', 'ahn2_05m_r' or 'ahn2_5m'
AHN3: 'AHN3_05m_DSM', 'AHN3_05m_DTM', 'AHN3_5m_DSM' or 'AHN3_5m_DTM'
AHN4: 'AHN4_DTM_05m', 'AHN4_DTM_5m', 'AHN4_DSM_05m' or 'AHN4_DSM_5m'
The default is 'AHN4_DTM_5m'.
AHN1: 'AHN1_5M'
AHN2: 'AHN2_05M_I', 'AHN2_05M_N', 'AHN2_05M_R' or 'AHN2_5M_M'
AHN3: 'AHN3_05M_M', 'AHN3_05M_R', 'AHN3_5M_M' or 'AHN3_5M_R'
AHN4: 'AHN4_05M_M', 'AHN4_05M_R', 'AHN4_5M_M' or 'AHN4_5M_R'
AHN5: 'AHN5_5M_M', 'AHN5_5M_R', 'AHN5_05M_M' or 'AHN5_05M_R'
The default is 'AHN4_5M_M'.
method : str, optional
Method used to resample ahn to grid of ds. See documentation of
nlmod.resample.structured_da_to_ds for possible values. The default is
Expand All @@ -50,18 +54,7 @@ def get_ahn(ds=None, identifier="AHN4_DTM_5m", method="average", extent=None):
"""
if extent is None and ds is not None:
extent = get_extent(ds)
version = int(identifier[3])
if version == 1:
ahn_ds_raw = get_ahn1(extent, identifier=identifier)
elif version == 2:
ahn_ds_raw = get_ahn2(extent, identifier=identifier)
elif version == 3:
ahn_ds_raw = get_ahn3(extent, identifier=identifier)
elif version == 4:
ahn_ds_raw = get_ahn4(extent, identifier=identifier)
else:
raise (ValueError(f"Unknown ahn-version: {version}"))

ahn_ds_raw = _get_ahn_ellipsis(extent, identifier=identifier)
ahn_ds_raw = ahn_ds_raw.drop_vars("band")

if ds is None:
Expand Down Expand Up @@ -303,15 +296,74 @@ def get_ahn4_tiles(extent=None):
return gdf


def _get_tiles_ellipsis(extent=None, crs=28992):
url = "https://api.ellipsis-drive.com/v3/path"
path_id = "a9d410ad-a2f6-404c-948a-fdf6b43e77a6"
timestamp_id = "87a21a71-c39f-4e92-a43b-207bc7dfe714"
url = f"{url}/{path_id}/vector/timestamp/{timestamp_id}/listFeatures"

r = requests.get(url)
if not r.ok:
raise (Exception(""))
gdf = gpd.GeoDataFrame.from_features(r.json()["result"]["features"], crs=4326)
gdf = gdf.to_crs(crs)
# remove small digits becuase of tcrs-transformation
gdf.geometry = gdf.geometry.apply(_round_coordinates, ndigits=1)

gdf = gdf.set_index("AHN")

if extent is not None:
gdf = gdf.loc[gdf.intersection(extent_to_polygon(extent)).area > 0]
return gdf


def _round_coordinates(geom, ndigits=2):

def _round_coords(x, y, z=None):
x = round(x, ndigits)
y = round(y, ndigits)

if z is not None:
z = round(x, ndigits)
return (x, y, z)
else:
return (x, y)

return shapely.ops.transform(_round_coords, geom)


@cache.cache_netcdf()
def get_ahn1(extent, identifier="AHN1_5M", as_data_array=None):
"""Download AHN1.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : str, optional
Only allowed value is 'AHN1_5M' (or the equivalent ahn1_5m). The default is
"AHN1_5M".
Returns
-------
xr.DataArray
DataArray of the AHN
"""
_assert_as_data_array_is_none(as_data_array)
identifier = _rename_identifier(identifier)

return _get_ahn_ellipsis(extent, identifier)


@cache.cache_netcdf()
def get_ahn1(extent, identifier="ahn1_5m", as_data_array=True):
def get_ahn1_legacy(extent, identifier="ahn1_5m", as_data_array=True):
"""Download AHN1.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : TYPE, optional
identifier : str, optional
Only allowed value is 'ahn1_5m'. The default is "ahn1_5m".
as_data_array : bool, optional
return the data as as xarray DataArray if true. The default is True.
Expand All @@ -331,14 +383,36 @@ def get_ahn1(extent, identifier="ahn1_5m", as_data_array=True):


@cache.cache_netcdf()
def get_ahn2(extent, identifier="ahn2_5m", as_data_array=True):
def get_ahn2(extent, identifier="AHN2_5M_M", as_data_array=None):
"""Download AHN2.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : TYPE, optional
identifier : str, optional
Possible values are 'AHN2_05M_I', 'AHN2_05M_N', 'AHN2_05M_R' and
'AHN2_5M_M'. The default is "AHN2_5M_M".
Returns
-------
xr.DataArray
DataArray of the AHN
"""
_assert_as_data_array_is_none(as_data_array)
identifier = _rename_identifier(identifier)
return _get_ahn_ellipsis(extent, identifier)


@cache.cache_netcdf()
def get_ahn2_legacy(extent, identifier="ahn2_5m", as_data_array=True):
"""Download AHN2.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : str, optional
Possible values are 'ahn2_05m_i', 'ahn2_05m_n', 'ahn2_05m_r' and 'ahn2_5m'. The
default is "ahn2_5m".
as_data_array : bool, optional
Expand All @@ -355,14 +429,36 @@ def get_ahn2(extent, identifier="ahn2_5m", as_data_array=True):


@cache.cache_netcdf()
def get_ahn3(extent, identifier="AHN3_5m_DTM", as_data_array=True):
def get_ahn3(extent, identifier="AHN3_5M_M", as_data_array=None):
"""Download AHN3.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : TYPE, optional
identifier : str, optional
Possible values are 'AHN3_05M_M', 'AHN3_05M_R', 'AHN3_5M_M' and
'AHN3_5M_R'. The default is "AHN3_5M_M".
Returns
-------
xr.DataArray
DataArray of the AHN
"""
_assert_as_data_array_is_none(as_data_array)
identifier = _rename_identifier(identifier)
return _get_ahn_ellipsis(extent, identifier)


@cache.cache_netcdf()
def get_ahn3_legacy(extent, identifier="AHN3_5m_DTM", as_data_array=True):
"""Download AHN3.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : str, optional
Possible values are 'AHN3_05m_DSM', 'AHN3_05m_DTM', 'AHN3_5m_DSM' and
'AHN3_5m_DTM'. The default is "AHN3_5m_DTM".
as_data_array : bool, optional
Expand All @@ -378,14 +474,36 @@ def get_ahn3(extent, identifier="AHN3_5m_DTM", as_data_array=True):


@cache.cache_netcdf()
def get_ahn4(extent, identifier="AHN4_DTM_5m", as_data_array=True):
def get_ahn4(extent, identifier="AHN4_5M_M", as_data_array=None):
"""Download AHN4.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : TYPE, optional
identifier : str, optional
Possible values are 'AHN4_05M_M', 'AHN4_05M_R', 'AHN4_5M_M' and
'AHN4_5M_R'. The default is "AHN4_5M_M".
Returns
-------
xr.DataArray
DataArray of the AHN
"""
_assert_as_data_array_is_none(as_data_array)
identifier = _rename_identifier(identifier)
return _get_ahn_ellipsis(extent, identifier)


@cache.cache_netcdf()
def get_ahn4_legacy(extent, identifier="AHN4_DTM_5m", as_data_array=True):
"""Download AHN4.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : str, optional
Possible values are 'AHN4_DTM_05m', 'AHN4_DTM_5m', 'AHN4_DSM_05m' and
'AHN4_DSM_5m'. The default is "AHN4_DTM_5m".
as_data_array : bool, optional
Expand All @@ -400,6 +518,65 @@ def get_ahn4(extent, identifier="AHN4_DTM_5m", as_data_array=True):
return _download_and_combine_tiles(tiles, identifier, extent, as_data_array)


@cache.cache_netcdf()
def get_ahn5(extent, identifier="AHN5_5M_M"):
"""Download AHN5.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : str, optional
Possible values are 'AHN5_5M_M' (dtm), 'AHN5_5M_R' (dsm), 'AHN5_05M_M' (dtm) and
'AHN5_05M_R' (dsm). The default is "AHN5_5M_M".
Returns
-------
xr.DataArray
DataArray of the AHN
"""

return _get_ahn_ellipsis(extent, identifier)


@cache.cache_netcdf()
def _get_ahn_ellipsis(extent, identifier="AHN5_5M_M"):
"""Download AHN5.
Parameters
----------
extent : list, tuple or np.array
extent
identifier : str, optional
Possible values are 'AHN5_5M_M' (dtm), 'AHN5_5M_R' (dsm), 'AHN5_05M_M' (dtm) and
'AHN5_05M_R' (dsm). The default is "AHN5_5M_M".
Returns
-------
xr.DataArray
DataArray of the AHN
"""
tiles = _get_tiles_ellipsis(extent=extent)
if identifier not in tiles.columns:
raise (ValueError(f"Unknown ahn-identifier: {identifier}"))
tiles = tiles[~tiles[identifier].isna()]
das = []
for tile in tqdm(tiles.index, desc=f"Downloading tiles of {identifier}"):
url = tiles.at[tile, identifier]
if url.endswith(".zip"):
path = url.split("/")[-1].replace(".zip", ".TIF")
if path.lower().endswith(".tif.tif"):
path = path[:-4]
da = rioxarray.open_rasterio(
rasterio.open(f"zip+{url}!/{path}"), mask_and_scale=True
)[0]
else:
da = rioxarray.open_rasterio(url, mask_and_scale=True)[0]
da = da.sel(x=slice(extent[0], extent[1]), y=slice(extent[3], extent[2]))
das.append(da)
return merge_arrays(das)


def _download_and_combine_tiles(tiles, identifier, extent, as_data_array):
"""Internal method to download and combine ahn-data."""
if tiles.empty:
Expand All @@ -423,3 +600,38 @@ def _download_and_combine_tiles(tiles, identifier, extent, as_data_array):
da = da.sel(x=slice(extent[0], extent[1]), y=slice(extent[3], extent[2]))
return da
return memfile


def _rename_identifier(identifier):
rename = {
"ahn1_5m": "AHN1_5M",
"ahn2_05m_i": "AHN2_05M_I",
"ahn2_05m_n": "AHN2_05M_N",
"ahn2_05m_r": "AHN2_05M_R",
"ahn2_5m": "AHN2_5M_M",
"AHN3_05m_DTM": "AHN3_05M_M",
"AHN3_05m_DSM": "AHN3_05M_R",
"AHN3_5m_DTM": "AHN3_5M_M",
"AHN3_5m_DSM": "AHN3_5M_R",
"AHN4_DTM_05m": "AHN4_05M_M",
"AHN4_DSM_05m": "AHN4_05M_R",
"AHN4_DTM_5m": "AHN4_5M_M",
"AHN4_DSM_5m": "AHN4_5M_R",
}
if identifier in rename:
id_new = rename[identifier]
logger.warning(f"The identifier {identifier} is deprecated. Rename to {id_new}")
identifier = id_new
return identifier


def _assert_as_data_array_is_none(as_data_array):
if as_data_array is not None:
raise (
DeprecationWarning(
"The as_data_array-argument has been removed from the ahn-"
"methods, and these methods now allways return a DataArray. "
"Remove the as_data_array-argument or use the legcay ahn-"
"methods."
)
)

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