Popular repositories Loading

1. Variant_Pathogenicity_Classifier Variant_Pathogenicity_Classifier Public

   My first full deep-learning genomics project: a CNN trained on multi-chromosome sequence windows to predict pathogenic vs benign variants. Built from scratch as a learning experiment—part scientifi…

   Jupyter Notebook 1

2. DICPP DICPP Public template

   Deep learning tool that predicts drug-induced cell phenotypes from multi-channel microscopy images and provides interpretable outputs using Grad-CAM.

   Jupyter Notebook 1

3. CRISPREfficiencyPredictor CRISPREfficiencyPredictor Public

   A multi-stage deep learning project focused on predicting CRISPR guide efficiency using real experimental data. This repository documents each development step from preprocessing to model evaluatio…

   Jupyter Notebook

4. Biolip-binding-site-gnn Biolip-binding-site-gnn Public

   Lightweight GraphSAGE baseline for predicting ligand-binding residues from BioLiP protein structures, with feature ablations and imbalanced evaluation (AUPRC, F1, p15/p20 thresholds) plus Top-K vis…

   Jupyter Notebook