Open
Description
Describe the bug
A single point calculation that completed on version v20.1
cannot be evaluated with v20.2
and v22.1
. This is a specific example, a pair of OH
separated by 4Å, seen as part of re-evaluating an earlier MD run which then worked nicely but re-evaluating it has failed. See a simplified input below with a specific example.
To Reproduce
Run the following script with version v20.1
and v20.2
/v22.1
import ase.io
from xtb.ase.calculator import XTB
at = ase.Atoms(
numbers=[8, 1, 8, 1],
positions=[
[0.0, 0.0, 0.0],
[0.0, -1.0, -0.1],
[4.0, 0.0, 0.0],
[4.5, 0.0, 0.0],
],
)
at.calc = XTB()
print("calculator parameters:", at.calc.parameters)
print(at.get_potential_energy())
print(at.get_forces())
On v20.1
: (xtb 6.3.3
)
calculator parameters: {'method': 'GFN2-xTB', 'accuracy': 1.0, 'max_iterations': 250, 'electronic_temperature': 300.0, 'solvent': 'None', 'cache_api': True}
-214.44720907410627
[[-3.96791193e-02 -1.37415655e+00 4.02421008e-07]
[ 4.04500519e-02 1.39420829e+00 -6.16613596e-06]
[-1.98186104e+02 -4.99697091e-02 -5.89461047e-05]
[ 1.98185333e+02 2.99179612e-02 6.47098196e-05]]
On v20.2
& v22.1
: (xtb 6.5.0
& 6.5.1
)
calculator parameters: {'method': 'GFN2-xTB', 'accuracy': 1.0, 'max_iterations': 250, 'electronic_temperature': 300.0, 'solvent': 'None', 'cache_api': True}
Traceback (most recent call last):
File "/home/tks32/.conda/envs/xtb-20.2/lib/python3.8/site-packages/xtb/ase/calculator.py", line 231, in calculate
self._res = self._xtb.singlepoint(self._res)
File "/home/tks32/.conda/envs/xtb-20.2/lib/python3.8/site-packages/xtb/interface.py", line 814, in singlepoint
raise XTBException(self.get_error("Single point calculation failed"))
xtb.interface.XTBException: Single point calculation failed:
-2- xtb_calculator_singlepoint: Electronic structure method terminated
-1- scf: Self consistent charge iterator did not converge
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "xtb-debug-1.py", line 20, in <module>
print(at.get_potential_energy())
File "/home/tks32/.conda/envs/xtb-20.2/lib/python3.8/site-packages/ase/atoms.py", line 731, in get_potential_energy
energy = self._calc.get_potential_energy(self)
File "/home/tks32/.conda/envs/xtb-20.2/lib/python3.8/site-packages/ase/calculators/calculator.py", line 709, in get_potential_energy
energy = self.get_property('energy', atoms)
File "/home/tks32/.conda/envs/xtb-20.2/lib/python3.8/site-packages/ase/calculators/calculator.py", line 737, in get_property
self.calculate(atoms, [name], system_changes)
File "/home/tks32/.conda/envs/xtb-20.2/lib/python3.8/site-packages/xtb/ase/calculator.py", line 233, in calculate
raise ase_calc.CalculationFailed("xtb could not evaluate input")
ase.calculators.calculator.CalculationFailed: xtb could not evaluate input
Both tested with the same ubuntu machine using Conda, see env files below, and re-tried on MacOS (Intel & M2 as well) for the latest version.
Expected behaviour
Would expect the calculation to be successful on the later versions as well.
Additional context
conda info:
active environment : xtb-22.1
active env location : /home/tks32/.conda/envs/xtb-22.1
shell level : 10
user config file : /home/tks32/.condarc
populated config files : /opt/womble/miniconda3/.condarc
conda version : 23.1.0
conda-build version : not installed
python version : 3.8.5.final.0
virtual packages : __archspec=1=x86_64
__glibc=2.27=0
__linux=5.4.0=0
__unix=0=0
base environment : /opt/womble/miniconda3 (writable)
conda av data dir : /opt/womble/miniconda3/etc/conda
conda av metadata url : None
channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
package cache : /opt/womble/miniconda3/pkgs
/home/tks32/.conda/pkgs
envs directories : /home/tks32/.conda/envs
/opt/womble/miniconda3/envs
platform : linux-64
user-agent : conda/23.1.0 requests/2.28.1 CPython/3.8.5 Linux/5.4.0-42-generic ubuntu/18.04.6 glibc/2.27
UID:GID : 220009:13000
netrc file : None
offline mode : False