Upgrade jsoo

[hhugo]

No description provided.

[hhugo]

I find the esy workflow quite difficult to deal with...

[ospencer]

It's usually not so bad. I don't know what's going on here, though.

[hhugo]

The CI is happy on ubuntu https://github.com/hhugo/grain/actions/runs/13989268415/job/39169369435?pr=2

Failing on macos because of cmake
Failing on windows because of ocp-indent

• I had to add (data_only_dirs node_modules) in compiler/dune, otherwise dune would complain about dune files in compiler/node_modules/ocaml
• pin binaryen to include jsoo 6 fixes
• pin dune because it has a with-dev-setup dependencyon a recent version of ppx_expect that is not available on 4.14. I don't understand why esy want to installwith-dev-setup` for dune.
• the hacks.js files are no longer necessary because already part of the latest release.

The diff in esy.json can probably be cleaned up and reduced. It's the result of many experiment.

[spotandjake]

On my branch #2233 I got past the ocp-indent issue by vendoring and disabling the test suite, the issue is related to a symlink in the tests censored version here, I think we might need to make a pr handling to the esy opam patches repo handling this behavior correctly, still ran into issues with conf-cmake though.

[hhugo]

In #2255, I left the binaryen dep unchanged and didn't see any issue with dune