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McKeown test file #53

Description

@globbestael

There are problems with the EndNote import of some OVID files in RIS format (e.g. 0_Ovid_search_results_1_to_1000.ris).

PROBLEM

  • GOOD: if the OVID file has no original title (T2), then the journal fields (JF (and JA?)) are imported as journal (T2)
  • BAD: if the OVID file does have an original title (t2), then the journal fields (JF (and JA?)) are not imported and the original title (T2) is imported as journal (T2)

QUESTIONS

  • which import filter should be used?
  • more information in her article or in the additional files?
  • or were the data directly imported from OVID into EndNote?

The Excel file 1.0_Manual_abstraction_&_benchmark set.xlsx has this information in the right columns (e.g. T2 in AA/"OT" column). That Excel file has also manually added columns (e.g. AC/"PM" with pubmed link)

Record 740 of 0_Ovid_search_results_1_to_1000.ris

740.
TY  - JOUR
ID  - 4972968
T1  - [Chemotaxinomic study on Paneolus. Research on the presence of psychotropic indole bodies in these fungi].
T2  - Etude chimiotaxinomique sur les Panaeolus. Recherches sur la presence des corps indoliques psychotropes dans ces champignons.
A1  - Ola'h, G M
Y1  - 1968//
KW  - *Basidiomycota/cl [Classification]
KW  - *Hallucinogens/an [Analysis]
KW  - *Psilocybin/an [Analysis]
KW  - Spectrum Analysis
JF  - Comptes rendus hebdomadaires des seances de l'Academie des sciences. Serie D: Sciences naturelles
JA  - C R Acad Sci Hebd Seances Acad Sci D
VL  - 267
IS  - 17
SP  - 1369
EP  - 72
CY  - France
M1  - c9c, 7501107
L2  - http://ovidsp.ovid.com/ovidweb.cgi?T=JS&PAGE=reference&D=med1&NEWS=N&AN=4972968
ER  -  

when exported in RIS gives:

TY  - JOUR
AN  - 4972968
AU  - Ola'h, G. M.
IS  - 17
KW  - *Basidiomycota/cl [Classification]
*Hallucinogens/an [Analysis]
*Psilocybin/an [Analysis]
Spectrum Analysis
N1  - c9c, 7501107
PY  - 1968
SP  - 1369-72
ST  - [Chemotaxinomic study on Paneolus. Research on the presence of psychotropic indole bodies in these fungi]
T2  - Etude chimiotaxinomique sur les Panaeolus. Recherches sur la presence des corps indoliques psychotropes dans ces champignons.
TI  - [Chemotaxinomic study on Paneolus. Research on the presence of psychotropic indole bodies in these fungi]
UR  - http://ovidsp.ovid.com/ovidweb.cgi?T=JS&PAGE=reference&D=med1&NEWS=N&AN=4972968
VL  - 267
ID  - 3135
ER  - 
  • The journal names (originally JF and JA) are not exported
  • The original title (originally T2) is exported as the journal name (T2)

Another example in 0_Ovid_search_results_1_to_1000.ris are records 272 (good) and 273 (bad)

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