Thunderbolt

A processing and analysis pipeline for high throughput proteomics datasets.

A demonstration of Thunderbolt may be found at https://thunderbolt.sydney.edu.au.

To install:

Install the latest versions of R and RStudio.
From within an R instance with permissions to install packages, run source("package.installer.R") to install the packages required for Thunderbolt to run.
Run the Shiny app either from within RStudio using the instructions by opening server.R or ui.R and clicking "Run app" above the script pane. Alternatively, follow the instructions provided at https://docs.posit.co/shiny-server/ to run on Shiny Server.

Name		Name	Last commit message	Last commit date
Latest commit History 6 Commits
analysis		analysis
compare		compare
fileupload.main		fileupload.main
fileupload		fileupload
interactome		interactome
keggfiles		keggfiles
pathway		pathway
search		search
www		www
EigenMS.R		EigenMS.R
ProteinGroups.csv		ProteinGroups.csv
README.md		README.md
Thunderbolt.Rproj		Thunderbolt.Rproj
corrplot.edit.r		corrplot.edit.r
db.installer.R		db.installer.R
fisherfuncs.r		fisherfuncs.r
load.dataset.R		load.dataset.R
package.installer.R		package.installer.R
pre.functions.r		pre.functions.r
server.R		server.R
shinyextensions.R		shinyextensions.R
ui.R		ui.R
uiextensions.R		uiextensions.R

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