test: Add and run pre-commit on existing files, update tests to cov…

…er `python==3.9-3.11`

.github/workflows/docker_push.yml

@@ -9,13 +9,13 @@ jobs:
     name: Checkout code
     runs-on: ubuntu-latest
     steps:
-    - name: Checkout
-      uses: actions/checkout@v2
+      - name: Checkout
+        uses: actions/checkout@v2
 
-    - name: Build and push Docker images
-      uses: docker/build-push-action@v1
-      with:
-        username: ${{ secrets.DOCKER_USERNAME }}
-        password: ${{ secrets.DOCKER_PASSWORD }}
-        repository: garethjns/social-distancing-sim
-        tags: 0.10.1,latest
+      - name: Build and push Docker images
+        uses: docker/build-push-action@v1
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_PASSWORD }}
+          repository: garethjns/social-distancing-sim
+          tags: 0.10.1,latest

.github/workflows/publish.yml

@@ -6,23 +6,22 @@ on:
 
 jobs:
   deploy:
-
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v2
-    - name: Set up Python
-      uses: actions/setup-python@v1
-      with:
-        python-version: '3.x'
-    - name: Install dependencies
-      run: |
-        python -m pip install --upgrade pip
-        pip install setuptools wheel twine
-    - name: Build and publish
-      env:
-        TWINE_USERNAME: __token__
-        TWINE_PASSWORD: ${{ secrets.PYPI_TOKEN }}
-      run: |
-        python setup.py sdist bdist_wheel
-        twine upload dist/*
+      - uses: actions/checkout@v2
+      - name: Set up Python
+        uses: actions/setup-python@v1
+        with:
+          python-version: "3.x"
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install setuptools wheel twine
+      - name: Build and publish
+        env:
+          TWINE_USERNAME: __token__
+          TWINE_PASSWORD: ${{ secrets.PYPI_TOKEN }}
+        run: |
+          python setup.py sdist bdist_wheel
+          twine upload dist/*

.github/workflows/pythonpackage.yml

@@ -1,37 +1,39 @@
-name: Testing is key
+name: Tests
 
 on:
   push:
-    branches: [ master ]
+    branches: [master]
   pull_request:
-    branches: [ master ]
+    branches: [master]
 
 jobs:
   build:
-
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [3.6, 3.7, 3.8]
+        python-version: ["3.9", "3.10", "3.11"]
 
     steps:
-    - uses: actions/checkout@v2
-    - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v1
-      with:
-        python-version: ${{ matrix.python-version }}
-    - name: Install dependencies
-      run: |
-        python -m pip install --upgrade pip
-        pip install -r requirements.txt
-        pip install -r requirements_agents.txt
-    - name: Lint with flake8
-      run: |
-        pip install flake8
-        # stop the build if there are Python syntax errors or undefined names
-        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
-        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
-        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
-    - name: Test with pytest
-      run: |
-        python -m unittest discover
+      - uses: actions/checkout@v2
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v1
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install -r requirements.txt
+      - name: Lint with flake8
+        run: |
+          pip install flake8
+          # stop the build if there are Python syntax errors or undefined names
+          flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+          # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+          flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+      - name: Run pre-commit tests
+        run: |
+          pip install pre-commit
+          pre-commit run --all-files
+      - name: Test with pytest
+        run: |
+          python -m unittest discover

.pre-commit-config.yaml

@@ -0,0 +1,43 @@
+# See https://pre-commit.com for more information
+# See https://pre-commit.com/hooks.html for more hooks
+# Don't run pre-commit on files under third-party/
+exclude: "^\
+  (third-party/.*)\
+  *.md\
+  "
+
+repos:
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v5.0.0
+    hooks:
+      - id: check-added-large-files # prevents giant files from being committed.
+      - id: check-case-conflict # checks for files that would conflict in case-insensitive filesystems.
+      - id: check-merge-conflict # checks for files that contain merge conflict strings.
+      - id: check-yaml # checks yaml files for parseable syntax.
+      - id: detect-private-key # detects the presence of private keys.
+      - id: end-of-file-fixer # ensures that a file is either empty, or ends with one newline.
+      - id: fix-byte-order-marker # removes utf-8 byte order marker.
+      - id: mixed-line-ending # replaces or checks mixed line ending.
+      - id: trailing-whitespace # trims trailing whitespace.
+
+  - repo: https://github.com/pre-commit/mirrors-prettier
+    rev: v4.0.0-alpha.8
+    hooks:
+      - id: prettier
+        files: \.(js|ts|jsx|tsx|css|less|html|json|markdown|yaml|yml)$
+
+  - repo: https://github.com/psf/black
+    rev: 24.10.0
+    hooks:
+      - id: black
+  - repo: https://github.com/PyCQA/isort
+    rev: 5.13.2
+    hooks:
+      - id: isort
+        args: [--profile=black]
+
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: v0.7.1
+    hooks:
+      - id: ruff
+        args: [--fix]