add multiple fastqs to input collection

galaxyproject · Oct 18, 2024 · 2568c16 · 2568c16
1 parent d22c305
commit 2568c16
Showing 1 changed file with 38 additions and 2 deletions.
diff --git a/workflows/transcriptomics/rnaseq-pe/rnaseq-pe-tests.yml b/workflows/transcriptomics/rnaseq-pe/rnaseq-pe-tests.yml
@@ -14,11 +14,47 @@
         elements:
         - identifier: forward
           class: File
-          location: https://zenodo.org/records/13888221/files/GSM461177_1.fastqsanger
+          location: https://zenodo.org/records/13951092/files/GSM461177_1.fastqsanger
           filetype: fastqsanger
         - identifier: reverse
           class: File
-          location: https://zenodo.org/records/13888221/files/GSM461177_2.fastqsanger
+          location: https://zenodo.org/records/13951092/files/GSM461177_2.fastqsanger
+          filetype: fastqsanger
+      - class: Collection
+        type: paired
+        identifier: GSM461177
+        elements:
+        - identifier: forward
+          class: File
+          location: https://zenodo.org/records/13951092/files/GSM461178_1.fastqsanger
+          filetype: fastqsanger
+        - identifier: reverse
+          class: File
+          location: https://zenodo.org/records/13951092/files/GSM461178_2.fastqsanger
+          filetype: fastqsanger
+      - class: Collection
+        type: paired
+        identifier: GSM461177
+        elements:
+        - identifier: forward
+          class: File
+          location: https://zenodo.org/records/13951092/files/GSM461180_1.fastqsanger
+          filetype: fastqsanger
+        - identifier: reverse
+          class: File
+          location: https://zenodo.org/records/13951092/files/GSM461180_2.fastqsanger
+          filetype: fastqsanger
+      - class: Collection
+        type: paired
+        identifier: GSM461177
+        elements:
+        - identifier: forward
+          class: File
+          location: https://zenodo.org/records/13951092/files/GSM461181_1.fastqsanger
+          filetype: fastqsanger
+        - identifier: reverse
+          class: File
+          location: https://zenodo.org/records/13951092/files/GSM461181_2.fastqsanger
           filetype: fastqsanger
     forward_adapter: GATCGGAAGAGCACACGTCTGAACTCCAGTCAC
     reverse_adapter: GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT